Gene Avi_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3228 
Symbol 
ID7388153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2668639 
End bp2669211 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID643652137 
Producthypothetical protein 
Protein accessionYP_002550321 
Protein GI222149364 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCCC GTGCCGCCGA CCAGACGGCA GGGGGCAAGT CCGGTCTTCC ACCGGTTGAG 
CGCTGGAACC CGGCGTTTTG CGGCGATATC GACATGGAAA TCCTGGCCGA TGGCACTTGG 
CTCTATCTCG GCACGCCGAT TGGCCGCGCG CCCTTGGTGC GGTTGTTTTC AACCGTGTTG 
CGCAAGGACG AGGATGGGAA GACCTATCTG GTCACGCCTG TGGAAAAACT GGGAATCAAG 
GTCGCAGACG CCCATTTCGT CGCCGTGGAA ATGACGGTTG GCGCAAGCAA TGGCGAACCT 
GTCTTGACCT TTCGCACCAA TGTCGGTGAT CTCGTTGAGG CCGGGCCGGA GCATCCACTG 
CGGTTTGTGA TCGAGGGCGA GCACCAGCAA TTGAAACCCT ATCTTGCCGT GCGCGGACGG 
TTGGAGGCGC TGGTGTCACG CGCCGTCACC TATGAGTTGA TGGCGCTGGG CGAGGTCATC 
GACATCGACG GACAGGCGAT GTTTGCCATC CGCTCCGGCG GGCAGACATT TGCCGTGATG 
CCAGCGGCGG ATCTGGATGG ATTGGCATCA TGA
 
Protein sequence
MIARAADQTA GGKSGLPPVE RWNPAFCGDI DMEILADGTW LYLGTPIGRA PLVRLFSTVL 
RKDEDGKTYL VTPVEKLGIK VADAHFVAVE MTVGASNGEP VLTFRTNVGD LVEAGPEHPL 
RFVIEGEHQQ LKPYLAVRGR LEALVSRAVT YELMALGEVI DIDGQAMFAI RSGGQTFAVM 
PAADLDGLAS