| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3221 |
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| Symbol | hemF |
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| ID | 7388149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2664895 |
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| End bp | 2665809 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652133 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002550317 |
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| Protein GI | 222149360 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.256547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACGGC CCATTCTGCC CAAAGGCTTG CCTGACGATA TCGAGGTAAA GAAGGCCACC
GCCCGCGCCT GGTTCGAAAG CCTTCGTGAC CAGATCTGCC GGTCCTTCGA GGCGCTGGAA
GACGAATTGA CCGGCCCCTT GAGCGATCGT GCGCCCGGAC GCTTCACGCC TAAGGATTGG
CAGCGTGAAG AAGGGCTTGG CGGTGGCGGA CGCATGTCGA TGATGAATGG CCGGGTGTTC
GAGAAGGTCG GCGTTCATAC CTCCACGGTG CATGGCGAAT TTTCGCCGGA ATTTCGCAAG
CAGATGCCGG GTGCCGAGGA AGACCCACGG TTCTGGGCCT CGGGCATCTC GCTCATCGCC
CATTCCTGCA ATCCGCATGT TCCGGCGGTG CATATGAACA CCCGCATGGT GGTCACCACC
AGCCAATGGT TCGGCGGCGG GGCGGATCTG ACCCCGGTGC TGGATCGACG CAGAACGCAG
GACGATGCCG ATACCGTTGC CTTTCATGCC GCTCTCGAAG CCGCCTGTGC GGCCCATCCT
GACGTCGCCG ATTATCCCCA TTACAAAGCA TGGTGCGAGG AATATTTCTT TCTGCCGCAT
CGCCAGGAAC CGCGTGGCAT CGGCGGAATT TTCTTCGACT GGCTGCATGC CGGGGAAAAA
TTCGACCTCT GGGCCGCCAA TTTCGCCTTC GTGCAGGATG TCGGACGCCA GTTCGCTGCC
GTCTATCCCG ATCTGGTCCG GCGCAACTTC AACACACCAT GGACCGAAGA AGACCGGGAA
GAACAGCTGG TGCGCCGTGG CCGTTATGTG GAGTTCAACC TGCTCTATGA TCGCGGCACG
ATTTTTGGCC TGAAGACCGG CGGCAATGTC GAATCGATTT TGTCGTCGCT TCCGCCCCTC
GTCCGCTGGC CTTGA
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| Protein sequence | MQRPILPKGL PDDIEVKKAT ARAWFESLRD QICRSFEALE DELTGPLSDR APGRFTPKDW
QREEGLGGGG RMSMMNGRVF EKVGVHTSTV HGEFSPEFRK QMPGAEEDPR FWASGISLIA
HSCNPHVPAV HMNTRMVVTT SQWFGGGADL TPVLDRRRTQ DDADTVAFHA ALEAACAAHP
DVADYPHYKA WCEEYFFLPH RQEPRGIGGI FFDWLHAGEK FDLWAANFAF VQDVGRQFAA
VYPDLVRRNF NTPWTEEDRE EQLVRRGRYV EFNLLYDRGT IFGLKTGGNV ESILSSLPPL
VRWP
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