| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3216 |
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| Symbol | |
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| ID | 7388145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2661130 |
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| End bp | 2661615 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652129 |
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| Product | tRNA/rRNA methyltransferase |
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| Protein accession | YP_002550313 |
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| Protein GI | 222149356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAATA GCATCACCGG CACCTCCCCC TCCACGCTCC GCATCGCCCT TTACCAGCCG
GATATTCCCG GCAATACCGG CACGATCCTA CGGCTCGCCG CCTGCCTGGG CCTGGGTGTC
GATATTATCG AGCCTGCCGG TTTCGACCTG TCGGACCGCA ATCTGAAGCG GGCGGGAATG
GACTATCTCG CCGCCGTCAC CCTCACCCGG CATGTCAACT GGGCGCAATT TGAGGATTGG
CGCAAGAACA GCGGGCGCCG GCTGGTTCTA GCCTCCACCA AGGCGGCCAT GCCCTATACC
GAACTTGCCT TCCAGCCCGA CGATATCCTG CTGTTTGGCC GCGAAAGCGC CGGGGTCCCC
GACCATGTCC ATGACGGCGC CGATGCCCGC ATCCTGATCC CGATGGTCGA GGGCCAGCGC
TCCATCAATG TCGCCATGTC GGCAGCGATG ATCGCCGGTG AGGCGCTGCG CCAAACACGG
GGCTGA
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| Protein sequence | MTNSITGTSP STLRIALYQP DIPGNTGTIL RLAACLGLGV DIIEPAGFDL SDRNLKRAGM
DYLAAVTLTR HVNWAQFEDW RKNSGRRLVL ASTKAAMPYT ELAFQPDDIL LFGRESAGVP
DHVHDGADAR ILIPMVEGQR SINVAMSAAM IAGEALRQTR G
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