| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3213 |
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| Symbol | |
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| ID | 7388144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2658803 |
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| End bp | 2660662 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652128 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002550312 |
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| Protein GI | 222149355 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACCT GGTTCGAACG CCAACTCAAT CCCTATCCGG CCGAGCAACC CAGCCTGCCG
CCCAAGGGCC TGTTCCGCTT CATCTGGCAT TATACCAGGC CCGCTGCCGG CTGGCTGGCG
CTGATGGCCT TGCTGGTCAT GCTGATTGCG GTGGGCGAGG TGATGCTCTT CCAGTTCCTC
GGCGATATCG TCACCTGGCT CTCGCATGCC AACCGCGATA CGTTCCTGCA AACCGAGGGC
TGGCGGCTGG TGGGCATGGG GGCCTTGGTC CTGGTGTTTC TGCCGGGCAT TGCCACGATC
AATTCGCTGA TCGTGCATCA GACACTGCTG GGCAATTTCC CGATGATCGC CCGTTGGCAG
ATGCATCGCT TCCTGCTCAA CCATTCCATG ACGTTTTTCG CCAACGAGTT TTCGGGCCGG
GTCTCGACCA AGGTCATGCA GACCTCGCTG GCGGTGCGCG AAACCGTGGT CAAGGTGCTG
GACGTTTTCG TCTATGTCAT TACCTATTTC ATCTCGATGC TGGTGGTGAT CGCCTCGGCC
GACCTGCGCC TGCTGGTGCC GATGCTGATC TGGCTTGGCA TCTATATCTC GATCGTCACC
TATTATGTGC CACGGTTGCG CAAGATTGCG GCACTTCAGG CCGATACCCG CTCGACCATG
ACCGGGCGGA TTGTCGATAG CTATACCAAC ATCGCCACGG TCAAGCTGTT CTCCCATACA
CGGCGGGAGG AGGACTATGC CAAGGGCGCG ATGGACGAAT TCCTGCAATC CGTCCATGCG
CAGATGCGTA AGGTGACGCT GTTTCAGGTC CTGGTCTATC TCAACAATTG CACGGTCATC
TTCCTGATCG GTGCGCTGTC CGTCTGGCTG TGGTTGACGG CCTCGATCCA GGTCGGTGCT
ATCGCCATTG CTATCGGGCT TGCCATGCGG GTCAACAGCA TGTCGCAATG GGTGATGTGG
GAAGTGTCGG CGCTGTTTGA AAATATCGGC ACCGTCTATG ACGGCATGGA GATGATGACC
AAGCCGCATG ACATTACCGA CAAGCCCGAT GCCAAGCCGC TGACCGTGCC GAAGGGCGAG
ATTGTCTATG ACAAGGTGCG CTTCCATTAT GGAAAGACGC GCGGCGTGAT CGACGATTTC
TCGCTGACCA TCAAGGCTGG CGAAAAGGTC GGGTTGGTTG GCCGCTCCGG CGCTGGCAAG
ACGACGCTGA TGAACCTGCT GCTGCGGTTC TACGATGTCG AAAAGGGCCA CGTTACCATC
GACGGGCAGG ATATCGGGGC GGTGACCCAG GATAGCCTGC GCGGTCAGAT CGGCGTCGTC
ACCCAGGATA CCTCGCTGCT GCACCGGTCG ATCCGCGATA ATATCGCCTA TGGCCGCCCG
GATGCCAGCG ATGCCGAAGT GGTCGAGGCA GCCAAGCGCG CCAATGCCTG GGACTTCATC
GAGCACCTCA TCGATATGCA GGGCCGGGTT GGTCTGGATG CGCAGGTGGG CGAGCGGGGT
GTAAAGCTGT CCGGCGGCCA GCGCCAGCGG ATTGCCATTG CCCGGGTCTT CCTCAAGAAC
GCACCGATCC TGGTGCTGGA TGAAGCGACC TCGGCGCTTG ACTCTGAGGT AGAGGCCGCC
ATTCAGGAGA GCCTGTTTGC CCTGATGGAG GGCAAGACCG TGATCGCCAT CGCACATCGG
TTATCGACAC TGACCGAAAT GGACCGTCTG GTCGTGCTGG ACAAGGGCCG GATCATCGAG
ACCGGCACCC ATCACCAGCT CGCCAGCCAG AGCGGCGTCT ATGCCGATCT ATGGAACCGC
CAGTCGGGTG GTTTTTTGGC CGACGAGGCC AACGAGGTGC AGGAAACGGC GGCGGAGTGA
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| Protein sequence | MFTWFERQLN PYPAEQPSLP PKGLFRFIWH YTRPAAGWLA LMALLVMLIA VGEVMLFQFL
GDIVTWLSHA NRDTFLQTEG WRLVGMGALV LVFLPGIATI NSLIVHQTLL GNFPMIARWQ
MHRFLLNHSM TFFANEFSGR VSTKVMQTSL AVRETVVKVL DVFVYVITYF ISMLVVIASA
DLRLLVPMLI WLGIYISIVT YYVPRLRKIA ALQADTRSTM TGRIVDSYTN IATVKLFSHT
RREEDYAKGA MDEFLQSVHA QMRKVTLFQV LVYLNNCTVI FLIGALSVWL WLTASIQVGA
IAIAIGLAMR VNSMSQWVMW EVSALFENIG TVYDGMEMMT KPHDITDKPD AKPLTVPKGE
IVYDKVRFHY GKTRGVIDDF SLTIKAGEKV GLVGRSGAGK TTLMNLLLRF YDVEKGHVTI
DGQDIGAVTQ DSLRGQIGVV TQDTSLLHRS IRDNIAYGRP DASDAEVVEA AKRANAWDFI
EHLIDMQGRV GLDAQVGERG VKLSGGQRQR IAIARVFLKN APILVLDEAT SALDSEVEAA
IQESLFALME GKTVIAIAHR LSTLTEMDRL VVLDKGRIIE TGTHHQLASQ SGVYADLWNR
QSGGFLADEA NEVQETAAE
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