Gene Avi_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3204 
SymbolfbcB 
ID7388139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2652213 
End bp2653481 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content57% 
IMG OID643652123 
Productubiquinol-cytochrome c reductase cytochrome b subunit 
Protein accessionYP_002550307 
Protein GI222149350 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.545864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGGC ATTCCAGTTA CCAGCCTTCG AGCGGGCTGA CACGGTGGAT CGATCAGCGG 
CTACCCTTGC CGCGCTTGGT CTATGACAGT TTCATTGCTT TTCCCGTGCC GCGCAATCTG
AACTACGCCT ATACATTCGG CGCCATGCTG GCGGTGATGC TGATCGTGCA GATCCTGACC
GGCGTCGTGC TGGCCATGCA TTATACCGCT GAAACCACAG TCGCCTTCAA TTCCGTCGAA
AAGATCATGC GCGACGTCAA TCATGGCTGG CTGCTGCGCT ATATGCATGC CAATGGCGCG
TCCTTCTTCT TCATCGCCGT CTATCTGCAC ATCGCCCGTG GTCTTTACTA CGGGTCCTAC
AAGGCTCCCC GCGAAATCCT CTGGATTCTC GGCGTGGTGA TCTTCCTGCT GATGATGGCA
ACTGCCTTCA TGGGCTACGT TCTGCCCTGG GGCCAGATGT CCTTCTGGGG GGCGACTGTT
ATCACCGGCT TCTTCTCGGC CTTCCCTTAT GTGGGCGAGT GGATCCAGAC CTTCCTGCTT
GGCGGCTTCG CCGTCGATCA GCCAACGCTG AATCGCTTCT TCTCGCTGCA TTACCTGCTG
CCCTTCATGA TCGCAGGCGT GGTTATCCTG CATATCTGGG CACTGCATGT CACCGGGCAG
ACCAATCCGA CCGGGGTTGA GGTGAAGTCA AAGACCGACA CGGTGCCGTT CACGCCCTAT
GCGACGCTGA AGGACGCCTT CGGCGTGTCG ATCTTCCTGA TCGCCTATGC CTGGTTCATC
TTCTACATGC CGAACTTCCT TGGCCATCCC GACAACTACA TCATGGCCGA CCCGCTGAAG
ACCCCGGCGC ATATCGTTCC TGAATGGTAC TTCCTGCCAT TCTACGCCAT GCTGCGCGCC
ATCACCTTCA ACGTGCTGTT CATCGATTCC AAGCTGGGTG GCGTGCTTGT CATGTTCGGG
GCGATCATCG TCTTGTTCTT CCTGCCCTGG CTGGATACGT CCAAGGTGCG TTCTGCTGTT
TACCGTCCCT GGTACAAGCT GTTCTTCTGG ATCTTTGTCG CCGATTGTAT CCTGCTCGGC
TGGCTCGGTT CACGTCAGCC GACGGATACA TTCACCACCA TGGCGCAGTT CGGTACGCTG
TATTACTTCG GCTTTTTCCT GGTAATCATG CCTCTGCTTG GTCTGCTGGA AACGCCACGG
CGGGTTCCGA ACTCGATTAC CGAGGCTGTT CTGGCCAAGA ACGGCAAAAC AGCCGAAGCG
CATGTCTGA
 
Protein sequence
MSGHSSYQPS SGLTRWIDQR LPLPRLVYDS FIAFPVPRNL NYAYTFGAML AVMLIVQILT 
GVVLAMHYTA ETTVAFNSVE KIMRDVNHGW LLRYMHANGA SFFFIAVYLH IARGLYYGSY
KAPREILWIL GVVIFLLMMA TAFMGYVLPW GQMSFWGATV ITGFFSAFPY VGEWIQTFLL
GGFAVDQPTL NRFFSLHYLL PFMIAGVVIL HIWALHVTGQ TNPTGVEVKS KTDTVPFTPY
ATLKDAFGVS IFLIAYAWFI FYMPNFLGHP DNYIMADPLK TPAHIVPEWY FLPFYAMLRA
ITFNVLFIDS KLGGVLVMFG AIIVLFFLPW LDTSKVRSAV YRPWYKLFFW IFVADCILLG
WLGSRQPTDT FTTMAQFGTL YYFGFFLVIM PLLGLLETPR RVPNSITEAV LAKNGKTAEA
HV