| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3203 |
|---|
| Symbol | fbcC |
|---|
| ID | 7388138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2651333 |
|---|
| End bp | 2652187 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643652122 |
|---|
| Product | cytochrome c1 |
|---|
| Protein accession | YP_002550306 |
|---|
| Protein GI | 222149349 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2857] Cytochrome c1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.457448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TTGCCACAAG CCTCCTGTCG CTGGCATTCG CCACCGGTCT CGGCTTTTCC
GCAGCGCTTG CGCAGGAACA TGCGGAAGGC GAAACGCCCC ATTACCCCAT TCATAAGCCA
GCCCCGGTGG AATGGAGTTT TTCCGGGCCT TTCGGCAAAT ATGACAAGGG ACAATTGCAG
CGCGGCCTGA AGATCTACAA GGAAGTCTGT TCCGCCTGCC ATTCCATGAA CCTGGTTTCC
TTCCGCACGC TGGAAGACCT GGGCTATTCG GAGGCCCAGG TGAAGACCTT TGCCGCCGAA
TACGAAGTGC AGGATGGGCC GAACGCGTCC GGCGAAATGT ATACCCGCAA GGCCGTGCCT
TCGGATCATT TCCCGTCGCC CTTCCCCAAC CATGAAGCCG CCGCTGCCGC CAATAATGGC
GCCGCACCAC CGGACATGTC GCTGCTGGCC AAGGCACGCG GCATCGAGCG TGGTTTCCCG
ACCTTCATCT TTGATATCTT CACGCAATAT CAGGAGGGCG GGCCGGATTA TATCCACGCG
CTGCTGACCG GCTATCAGGA CCCACCGGCT GGCGTGACGG TGGCCGAGGG CACCCATTAT
AACCCGTATT TCTCTGCCGC CTCGGCACTT GCCATGGCGC CGCCGCTCAG CGAGGGGCAG
GTGACCTATG ACGATGGCGC GCCGCAGACG GTTGACCAAT ATGCCAAGGA CGTTTCGGCT
TTCCTGATGT GGGCTGCCGA ACCGCATCTG GAAGAACGCA AGCGCACTGG CTTCATGGTC
ATGGTCTTCC TGCTGATCTT CTCCGGCCTG GTCTACCTCA CCAAGAAATC GGTTTATGCC
AACAAGGAAC ATTGA
|
|---|
| Protein sequence | MKKLATSLLS LAFATGLGFS AALAQEHAEG ETPHYPIHKP APVEWSFSGP FGKYDKGQLQ
RGLKIYKEVC SACHSMNLVS FRTLEDLGYS EAQVKTFAAE YEVQDGPNAS GEMYTRKAVP
SDHFPSPFPN HEAAAAANNG AAPPDMSLLA KARGIERGFP TFIFDIFTQY QEGGPDYIHA
LLTGYQDPPA GVTVAEGTHY NPYFSAASAL AMAPPLSEGQ VTYDDGAPQT VDQYAKDVSA
FLMWAAEPHL EERKRTGFMV MVFLLIFSGL VYLTKKSVYA NKEH
|
|---|
| |