Gene Avi_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3198 
Symbol 
ID7388135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2648881 
End bp2649360 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content55% 
IMG OID643652119 
ProductGlutathione peroxidase protein 
Protein accessionYP_002550303 
Protein GI222149346 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.246451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC ATGACTTTTC AGCCAAGGAT ATTACCGGTC GGGAGCGCAA GCTTGCCGAA 
TTTGCCGGAA AACTGCTCCT GATCGTCAAC ACCGCCAGCA AATGCGGCTT CACACCGCAA 
TATGAGGGCC TGGAGACCCT GCAAAAGCGT TTTCAGGACG ATCTCGTCAT CATCGGCTTT 
CCCTGCAACC AGTTCGGCGG CCAGGAACCG GGATCGGAAG CGGAAATTGC CAGCTTCTGC 
GACCTGAATT TCAAGGTCAG CTTCCCGATG TTTGCCAAGA TTGATGTGAA GGGCAACGAG 
GCCCATCCTC TCTACAAATA CCTGACCCAC GAAGTGCGCG GCATTCTCGG CACCGAGGCG 
ATCAAATGGA ATTTCACCAA ATTTCTGGTC GGCCGCGACG GCACCCCGAT TGCCCGCTAT 
GCGCCGATCA CCAAGCCGGA AGAAATTGCC GATGATATTG CCAAGGCGGT GAAGGGCTAA
 
Protein sequence
MNVHDFSAKD ITGRERKLAE FAGKLLLIVN TASKCGFTPQ YEGLETLQKR FQDDLVIIGF 
PCNQFGGQEP GSEAEIASFC DLNFKVSFPM FAKIDVKGNE AHPLYKYLTH EVRGILGTEA 
IKWNFTKFLV GRDGTPIARY APITKPEEIA DDIAKAVKG