Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3197 |
Symbol | |
ID | 7388134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2648409 |
End bp | 2648894 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652118 |
Product | hypothetical protein |
Protein accession | YP_002550302 |
Protein GI | 222149345 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.440702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATGG TTGACCTGTT CCCCTTCGAG CAAAAAGTCG TGCTCGGCAC CCGCCATTTC AACGCGGAGG ACATTATCCG CTTTGCCACA AAATTCGATC CGCAGCCCTT CCATGTCGAT GCGGAAGCGG CGAAGTCCTA CGTCTTCGGC GGTCTCTGCG CCTCGGGATG GCATACCTGT TCGGTGTGGA TGCGGACCTT TCTCGACTTC ATGGGCGAAG CCAACGCCAA AGCCATTGCC GAAGGCGTGA CACCGCCGCG GCTTGGCCCC TCGCCCGGCT TTACCGACCT GAAATGGCTG AAACCGGTCT ATGCCGGGGA CGACATTACC TATAGCCTGA CGGCACAAAA CAGCCGTGCG CTCAGATCGC GTCCCGGCTG GCACCTCCAC GCCAGCGTTG CCGAAGGCAT GAACCAACAG GGCGAGCCGG TGCTGCGTTT CGTCAGCACC GTTCTTGAAC AGGAGAATGA CAATGAACGT TCATGA
|
Protein sequence | MRMVDLFPFE QKVVLGTRHF NAEDIIRFAT KFDPQPFHVD AEAAKSYVFG GLCASGWHTC SVWMRTFLDF MGEANAKAIA EGVTPPRLGP SPGFTDLKWL KPVYAGDDIT YSLTAQNSRA LRSRPGWHLH ASVAEGMNQQ GEPVLRFVST VLEQENDNER S
|
| |