Gene Avi_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3197 
Symbol 
ID7388134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2648409 
End bp2648894 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID643652118 
Producthypothetical protein 
Protein accessionYP_002550302 
Protein GI222149345 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.440702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATGG TTGACCTGTT CCCCTTCGAG CAAAAAGTCG TGCTCGGCAC CCGCCATTTC 
AACGCGGAGG ACATTATCCG CTTTGCCACA AAATTCGATC CGCAGCCCTT CCATGTCGAT
GCGGAAGCGG CGAAGTCCTA CGTCTTCGGC GGTCTCTGCG CCTCGGGATG GCATACCTGT
TCGGTGTGGA TGCGGACCTT TCTCGACTTC ATGGGCGAAG CCAACGCCAA AGCCATTGCC
GAAGGCGTGA CACCGCCGCG GCTTGGCCCC TCGCCCGGCT TTACCGACCT GAAATGGCTG
AAACCGGTCT ATGCCGGGGA CGACATTACC TATAGCCTGA CGGCACAAAA CAGCCGTGCG
CTCAGATCGC GTCCCGGCTG GCACCTCCAC GCCAGCGTTG CCGAAGGCAT GAACCAACAG
GGCGAGCCGG TGCTGCGTTT CGTCAGCACC GTTCTTGAAC AGGAGAATGA CAATGAACGT
TCATGA
 
Protein sequence
MRMVDLFPFE QKVVLGTRHF NAEDIIRFAT KFDPQPFHVD AEAAKSYVFG GLCASGWHTC 
SVWMRTFLDF MGEANAKAIA EGVTPPRLGP SPGFTDLKWL KPVYAGDDIT YSLTAQNSRA
LRSRPGWHLH ASVAEGMNQQ GEPVLRFVST VLEQENDNER S