| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3154 |
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| Symbol | |
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| ID | 7388104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2618003 |
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| End bp | 2618893 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652088 |
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| Product | permease |
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| Protein accession | YP_002550272 |
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| Protein GI | 222149315 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGTA TTCAGGCCAA TCTCCTTCTT CTTCTGGCTG CCGCCATCTG GGGCGGTGGG
TTCGTGGCGC AGTCCACCGC CATGGATCAT CTGGGCGCCA ACTGGTTCAA CGCCCTGCGA
TTTGGCATTG CAACAATTGT CCTGCTGCCT TTTGCCGTGC TCGAAAGCCG GCGTGCCCGA
GACAGATTGT CGGTGGGTGA CGTGAGGATG TTCGTCATTA TCGGCGTCCT GCTGTTTGCC
GCCCAGACCG CCCAGCAATT TGGCCTGAAA ACAACCACCG TGACCAATGC CAGTTTTCTC
ACCGGTCTCT ATGTGGTGAT CGTGCCGGTC ATGGCAGTGG TGTTTCTTCG GCACCGGCCC
CATTGGATCA TCTGGCCAGC GGCTTTGGCC GCCCTGCTCG GCATCCTGCT GCTCAGCGGC
GGCAGCCTGT CAGCCCTGAG TACAGGCGAC GGCCTGACCA TCCTGTGCGC CGGGTTTTTC
GCGGTGCAAA TCCTGCTGAC GGGCCGGATT ATCCAGACCC TGTCGCGGCC CTTGGCGCTT
GCCGCCATCC AGTTTGCCGT TACCGCCCTG CTCTGCACGC TCGCCGCCCT CAGCCTGGAG
CCGATCAGCC TTGCCGATAT CGAGAATTCG ATGACGCAGA TCCTTTATGG CGGCCTGCTG
TCGAGCGGAT TGGCCTTCAG CCTGCAAATC ATCGGCCAGC GCTACACATC CTCGTCTCAG
GCGGCGATTT TCATGTCGTC GGAGGCGCTG TTTGGTGCGC TCCTGGGCGC TGTCATCCTG
CATGAATCCT TGGCGCCAAT CGGCTATCTC GGCTGTGCCC TGATGTTTCT CGCCATGCTG
GCGGTGGAAA TCGTGCCCGA ATGGGGCAAA CAGCGCATTG TCCGGCAATA A
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| Protein sequence | MTRIQANLLL LLAAAIWGGG FVAQSTAMDH LGANWFNALR FGIATIVLLP FAVLESRRAR
DRLSVGDVRM FVIIGVLLFA AQTAQQFGLK TTTVTNASFL TGLYVVIVPV MAVVFLRHRP
HWIIWPAALA ALLGILLLSG GSLSALSTGD GLTILCAGFF AVQILLTGRI IQTLSRPLAL
AAIQFAVTAL LCTLAALSLE PISLADIENS MTQILYGGLL SSGLAFSLQI IGQRYTSSSQ
AAIFMSSEAL FGALLGAVIL HESLAPIGYL GCALMFLAML AVEIVPEWGK QRIVRQ
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