| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3147 |
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| Symbol | chaA |
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| ID | 7388100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2613239 |
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| End bp | 2614396 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652084 |
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| Product | Ca2+/H+ antiporter |
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| Protein accession | YP_002550268 |
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| Protein GI | 222149311 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.409231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAGTTT TGCTCCGGGA AAAGTCCCTG CTGATCCCCA TCGCCTTGGC GATCGCCGTG
TTCTTCCTCG AACATTCCCT GATCGAGGCC GGGCCAACCA TCAGCCTCAT CGCTGCCGCA
GTGTTGATTG GCGGCATATT GGTAGCCTCG ATCCGAGTCG CGCATCACGC GGAAATCCTG
GCTCGCCGGG TTGGCGACCC CTATGGCACA ATGATTCTCA CCCTGTCAGC CGTGGCCGTG
GAAGTGCTGA TCCTTGCCAT CATGATGCAG GGCGAAAGCT CACCTACCCT GGTGCGCGAC
ACGATCTATT CGGCTGTCAT GCTGGATATC AACGGTATTC TGGGCCTTGC CGCCCTGCTG
GGCGGGCTGA AACACGGCGA ACAGCCCTAT AATGACGATA GTGGCAAGAC CTATGGCGTG
ATGATCCTGA CGGCGATGGG CATCTCGATG ATCGTGCCAG AATTCATTCC CGTCGATAAA
TGGACCTATT ATTCCACCTT CACCATCTTT GCCATGCTGG CGCTTTATGG GCTGTTCTTG
CGCATGCAGG TCGGGCAGCA CAGCTATTTC TTCAGTTATA GCTATACCGG CCGCGCCGCG
CCCAAAACCA CGAAGGTCCC ATCCGCTGGC ATCGACACAG GAACAAGCGC CGCAGAACCA
CAGCAGGCCC CGCATGAGAG CGAAGCCCAT GACGAGGAAG AAGGAAGCAT CGCATCCTCC
ATCGCTGTCA TCCTGTTCGG TGTGGTGTTG ATCGGCGTTC TCGCTGAATT CATGTCCGCC
CTGATGACGG AGGGCCTGCG TGACACCGGC GCGCCACCAA CTATCATGGC CATCGTCGTT
GCCACCATTT CGGCTGCCCC CGAAATCATG ACCGCCCTGA AGGCGGCTTT GCGCAACCGT
ATGCAGGCCA CCGTCAACAT CGCCATGGGG GCATCGCTGT CGACCGTTAT CCTGACAGTG
CCGGTCATGG AGGCCATCGC GCTTTACACC GGCCAGCCCT TCATCATGGC GATGACCCCG
GTGCAGACGG TGATGGTGCT GATCACCCTT GTTGCGGCGG CCATCAACCT CAACGATGGC
GAGACCAATG CCATCGAGGG CATGACCCAT TTCATCCTGT TTGCCACCTT CATCATGCTG
TCTGCTCTGG GCCTTTGA
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| Protein sequence | MTVLLREKSL LIPIALAIAV FFLEHSLIEA GPTISLIAAA VLIGGILVAS IRVAHHAEIL
ARRVGDPYGT MILTLSAVAV EVLILAIMMQ GESSPTLVRD TIYSAVMLDI NGILGLAALL
GGLKHGEQPY NDDSGKTYGV MILTAMGISM IVPEFIPVDK WTYYSTFTIF AMLALYGLFL
RMQVGQHSYF FSYSYTGRAA PKTTKVPSAG IDTGTSAAEP QQAPHESEAH DEEEGSIASS
IAVILFGVVL IGVLAEFMSA LMTEGLRDTG APPTIMAIVV ATISAAPEIM TALKAALRNR
MQATVNIAMG ASLSTVILTV PVMEAIALYT GQPFIMAMTP VQTVMVLITL VAAAINLNDG
ETNAIEGMTH FILFATFIML SALGL
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