Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3139 |
Symbol | trxB |
ID | 7388093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2606412 |
End bp | 2607428 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652077 |
Product | thioredoxin-disulfide reductase |
Protein accession | YP_002550261 |
Protein GI | 222149304 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCACA CCACACGTCC CTCGCCACGG AAAGGAAAGA CCATGTCCGC CCGCCATACC AAAGTGCTGA TTATCGGCTC TGGTCCCGCC GGTTATACCG CCGCCATCTA TGCAGCCCGC GCCATGCTGA AACCGGTGTT GATCGCCGGC ATGGAACAGG GCGGCCAGCT GATGATCACC ACCGATGTGG AAAACTATCC CGGCTTTGCC GATCCGATCC AGGGCCCCTG GCTGATGGGC GAAATGCTGA AACAGGCAAC CCATGTCGGC ACGGAAATCG TCAACGACCT GGTGACCGAG GTGGAAACCA CCCGCCGCCC CTTCACCGTG AAGACCGATT CCGGCGCAGT CTGGACCGCC GATACGCTGA TCATCTGCAC CGGCGCCAAG GCGAAGTGGC TGGGCATCGA GAGCGAGCAG CATTTCCAGG GTTTCGGGGT TTCGGCCTGC GCCACCTGCG ATGGGTTTTT CTATCGCAAC AAGGACGTGA TCGTGGTCGG CGGCGGCAAT TCGGCGGTCG AGGAATCCCT CTACCTGTCG CATATCGCCA AGACCGTCAC CGTCGTGCAT CGCCGCGACA GTTTCCGCTC GGAGAAGATT TTGCAGGAGC GGCTGTTTGC CAAGGATAAT GTCAAGGTCC TCTGGAACAC CGTCATCGAT GAAGTCACCG GCATCCCGGC CAAGCCGCCA ATGCCGCCAT CGGTGACCGG CGTGCGGCTG AAGAACCTCG ACAGCGGCAT CGTCACCGAT ACCCCCATCG ACGGCGTCTT CGTCGCCATT GGCCATGCGC CGGCGGTGGA ACTGTTCACG GGCAAGCTGA AATTGAAGCC AAATGGCTAT CTGTGGACCG CCCCGGATTC GACCGCGACC GACGTGCCCG GCATTTTTGC CGCCGGCGAC GTGACGGATG ATATCTACCG CCAGGCTATT ACTGCTGCCG GCATGGGCTG TATGGCCGCC CTTGAGGCAG AACGTTATCT TGCCGCGGAG ATTATCCCGG CTCAGGCCGC GGAGTGA
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Protein sequence | MPHTTRPSPR KGKTMSARHT KVLIIGSGPA GYTAAIYAAR AMLKPVLIAG MEQGGQLMIT TDVENYPGFA DPIQGPWLMG EMLKQATHVG TEIVNDLVTE VETTRRPFTV KTDSGAVWTA DTLIICTGAK AKWLGIESEQ HFQGFGVSAC ATCDGFFYRN KDVIVVGGGN SAVEESLYLS HIAKTVTVVH RRDSFRSEKI LQERLFAKDN VKVLWNTVID EVTGIPAKPP MPPSVTGVRL KNLDSGIVTD TPIDGVFVAI GHAPAVELFT GKLKLKPNGY LWTAPDSTAT DVPGIFAAGD VTDDIYRQAI TAAGMGCMAA LEAERYLAAE IIPAQAAE
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