Gene Avi_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3135 
Symbol 
ID7388670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2603850 
End bp2604509 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID643652074 
Producthypothetical protein 
Protein accessionYP_002550258 
Protein GI222149301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.132309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGGC GCTGGGACAG CGCTATCACT TCAAAAGGGG GGACCATGAC GGTCGTTGCG 
CCAAACTTTG TCTTTGTACA TGTTCCGAAA TCCGCCGGGA GATCCATCAC CAGGGTGCTG 
GGTGGCGAGA CACAGGGGGT TCCGACCCAT ACGCCGTACA CGAAGCTCGC CAATTTCGGC 
ATCGACAAGC GTTTCAGCTT CGGCTTCGTT CGAAACCCAT GGGACCGAAT GGTATCCCTT 
TACTCGTTTC TTTGCCAGAA ACGGCTACAA GCCTATGAGT GCCCCGATTA CCAGCAGTAT 
ATTCGCGATA TCGGCTTCAA AGCCTGGCTG CTTGAAGATG AATATTATTC GCGGCATGAC 
GAACATTGGC CAGATGAAGC CCTGCCTCCT CTTCAACGCC GCTCGCAATT GTTCTGGTTG 
TCCGGCTGCG ACTTCATCGG AAAGATCGAA AACATCAATT CGGATTTCCG CCATATCCGC 
AAACGGATCG GATTGAAGCC GACCTTGATG GAAAGACTGC GTCTGACCAG CCCCGTCCCG 
AAGAAGAACA GCTCGAAACG CGGCAATTAT ACCCGCTATT TCGATGAGGA AACCAGAGCC 
TTTGTTGAGG CCCATTTCCA GGAGGAAATC CGCGTGTTCA ACTATACATT CGGCTCCTGA
 
Protein sequence
MLRRWDSAIT SKGGTMTVVA PNFVFVHVPK SAGRSITRVL GGETQGVPTH TPYTKLANFG 
IDKRFSFGFV RNPWDRMVSL YSFLCQKRLQ AYECPDYQQY IRDIGFKAWL LEDEYYSRHD 
EHWPDEALPP LQRRSQLFWL SGCDFIGKIE NINSDFRHIR KRIGLKPTLM ERLRLTSPVP 
KKNSSKRGNY TRYFDEETRA FVEAHFQEEI RVFNYTFGS