Gene Avi_3127 details

Gene Information

• Locus tag: Avi_3127
• Symbol: greA
• ID: 7388665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2599096
• End bp: 2599572
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643652069
• Product: transcription elongation factor GreA
• Protein accession: YP_002550253
• Protein GI: 222149296
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.59991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGATA AGGTACCGAT GACGCAGAAC GGCTTCTCCA AGCTTCAGGA GGAACTGCGC 
TGGCGTCAAC AAGAAGAACG TCCTCGGATC ATTGAGGCCA TTGCCGAAGC GCGCGCCCAT 
GGCGACCTTT CGGAAAATGC CGAATATCAT GCCGCCAAGG AAGCCCAGAG CCATAATGAA 
GGCCGGGTCT CCGAACTCGA AGATCTGACT GCGCGCGCGG AAGTCATCGA TCTGTCGAAA 
ATGTCCGGCT CGAAAATCAA GTTCGGCGCC ACCGTCAAGC TGATCGATGA AGATACCGAC 
GAGGAAAAAA TCTACCAGAT CGTCGGCGAT CAGGAAGCCG ATGTGAAGGC TGGCCGTATC 
TCGATTTCCT CGCCAATTGC CCGCGCCATG ATTGGCAAGG AAGCCGGTGA CAGTATCGAA 
GTCGTGGCTC CCGGCGGCTC AAAGGCTTAC GAAATTATCG CGGTCAACTG GGGTTGA 

 

Protein sequence

MVDKVPMTQN GFSKLQEELR WRQQEERPRI IEAIAEARAH GDLSENAEYH AAKEAQSHNE 
GRVSELEDLT ARAEVIDLSK MSGSKIKFGA TVKLIDEDTD EEKIYQIVGD QEADVKAGRI 
SISSPIARAM IGKEAGDSIE VVAPGGSKAY EIIAVNWG