Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3107 |
Symbol | mnhA |
ID | 7388653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2582996 |
End bp | 2583574 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643652057 |
Product | Na+/H+ antiporter |
Protein accession | YP_002550241 |
Protein GI | 222149284 |
COG category | [R] General function prediction only |
COG ID | [COG1268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.468263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACTT CTCTTCTTTC TCGAGTCCAT AAGAATAAAT TTTCAATTTT TATCGATAAA ATAATAGTTG TTTCAGCCGG CGTGCTGCTG ATGACCTTGG CTGCCAAAGT GCAAATCCCC TTCTGGCCGG TCCCAATGAC ACTGCATACC TTTGCGGTGA TGGCGTTCGC GCTGATGCTT GGGCCGCAGA TGTCGCTGAC CATCTTCACC ACCTACCTGG CCGTCGGTGC TGTTGGTGCG CCCGTGTTTT CCGGCTCCCC GGAACGCGGC ATCGGCCTTG CCTATATGGT GGGGCCAACC GGTGGCTATC TTGCCGGATA CTGGCTTGCG GCGTGGCTAA CCGGTTTGAT CGGCCATGGA CGCGGGCTGG CGATGCACCT TGTTGCCAGT TTTGCCGGTC TGGCATTGGT CTATGCCGCA GGTCTCGTCT GGCTTGCCTT CTTCGTTCCT GCCGCAACAC TGCTGTCCGT TGGGCTCCTG CCCTTTCTGG GTGGTGACCT GGTGAAATGT GTTCTTGCGG CGCTGATCGC CAGCCAGTGG CCATCAAAGG CAAAACGCCA GCAGGAGACG GAGCAATGA
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Protein sequence | MDTSLLSRVH KNKFSIFIDK IIVVSAGVLL MTLAAKVQIP FWPVPMTLHT FAVMAFALML GPQMSLTIFT TYLAVGAVGA PVFSGSPERG IGLAYMVGPT GGYLAGYWLA AWLTGLIGHG RGLAMHLVAS FAGLALVYAA GLVWLAFFVP AATLLSVGLL PFLGGDLVKC VLAALIASQW PSKAKRQQET EQ
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