| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3092 |
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| Symbol | |
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| ID | 7388641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2567867 |
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| End bp | 2569105 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652045 |
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| Product | peptidase protein |
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| Protein accession | YP_002550229 |
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| Protein GI | 222149272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.967873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGGC TTTCTTCTGA AAATACGACA GATTCCATTT CTGAAATAAC CGATATGACT
GTCAGCGCGC TTCACGCGCT TGCCTATCCA ATCGATACCC ATCTGGATTC GCTGTTTCTA
TCGCGACTGG CCGGATATGA TTTCTGGAAG GGAGACTGGA AGGCGCATCG GCGCTCCCTT
GTGGTCTGGC TGATTCGCAA AACCTCACCC AGAGGGCGCA ACAGGCCATT GTCCGAACAT
GTCAGCGGGC CTGATTTTCT GGAAGGCGGT TATGGTGGCG CCTGTTTCAG CGCCCATGCC
CTGTGGGAAA ATCTTATCCC GGCTCCCTTC CTTGACCCCT GGAAAAACTG GGTGGATCAT
CACCGCTATG TGGAAGAGGT TATCAGGCAG AGCCAGGGCC GGATGCGGCT GGCGCGCAAC
GCCCACGAGG TCCGCGTCGC CAAGGCGGAG GGTGCGCGAT GCGCGATCCT GTCCATGGAA
GGCGCGCATA TGCTGGGGCC GGGTGGGGTT AAAAGCCAGG CCCTGCGGCT GGACAGGTTG
GGAGAGATTG CCAAGGCCGG TGCCGCCTAT CTGACCCTCA ACCATTTCAG CCATACCGAT
ATCTCCGAGG CCGGTTATGC GCCTGTCAAT CCGTGGGGCA AGATCGAGGG TGGCGGGTTG
TCTGCCTTCG GCAGGCAGGT GGTGGAGCGC TGCGTCGATG TCGGACTGCT GGTGGATGTC
ACCCACACAT CCACGCAGGG GATTCTCGAT GCTTGTGAGA TTTGTGTTCG CCGCCATGTT
CCAGTCTTGG CCTCGCACGG CGCATCGCGC ACGGTGACAC GGGGCGGGGA GGAGAGACCT
TCACGTCATC TCGATCGGGC CTTCAGCGAT GAAGCCATCC GTGCCATTGT CCGGACCGGC
GGCTGTATCA GCGTTATCCT AGCACCGTAT TTCCTTCAGA ACCGCTATCT TGCGGATGGC
AAGCCGGACA TGGACGCCGA CATTGCCTTC GTGATCGCCT ATTATGAAGC GTTCGCGCAG
CTCATCGCCA GTATGGACAT TGTCGAGGAT CCCTGGAAGC ACCTGTCCTT TGGCAGCGAT
TTCGATGGTG GCATTTCCAG CCTGCCGACC GGCATGCAGA GCGGCGCCGA TCTACCGAAA
CTGACCGAAG CCATGGTCGC CGCCGGTTGG CCGGCGCAAC GGATCATCGA TGTCTATAGC
GGCAATTTCC TGCGTGTATG GGAACAGGTC CGGCCCTGA
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| Protein sequence | MDRLSSENTT DSISEITDMT VSALHALAYP IDTHLDSLFL SRLAGYDFWK GDWKAHRRSL
VVWLIRKTSP RGRNRPLSEH VSGPDFLEGG YGGACFSAHA LWENLIPAPF LDPWKNWVDH
HRYVEEVIRQ SQGRMRLARN AHEVRVAKAE GARCAILSME GAHMLGPGGV KSQALRLDRL
GEIAKAGAAY LTLNHFSHTD ISEAGYAPVN PWGKIEGGGL SAFGRQVVER CVDVGLLVDV
THTSTQGILD ACEICVRRHV PVLASHGASR TVTRGGEERP SRHLDRAFSD EAIRAIVRTG
GCISVILAPY FLQNRYLADG KPDMDADIAF VIAYYEAFAQ LIASMDIVED PWKHLSFGSD
FDGGISSLPT GMQSGADLPK LTEAMVAAGW PAQRIIDVYS GNFLRVWEQV RP
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