| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3079 |
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| Symbol | |
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| ID | 7388634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2556154 |
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| End bp | 2558097 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643652038 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550222 |
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| Protein GI | 222149265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0517526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG AAGAATTTTC ACTTGGTTCT AACGCTTTCA ATGTACTTGG AGCCCGGTTT
CAATCGACTG CTCAGGAGAT TGCTGACCTC GTCGACGACG CTGAAATTGG TCCATCGAGA
ACTGAGAACG TACTTAACAA GGCTCAGCAG GCTCTTGTTA CGCCACGTCT TCGTTTGCAG
GCCGAGCTAT CTTGGCTTCC TGAACTAAGT GAAACGCAAG TCGCGAAAGT GTTGGATCAG
TCTTCAAACA CAGATGAGGA GATTTTGCTG CAGACAATAG CGAACTTTCC TGACTTGGCT
AAGGTTAACG TCATCGCCGA CATGGCCTCG CGTCGAACCA TCACGAAGGA TGCGCTTGCT
GCATACCTAA ACACCTGGAA ATGGTTTGAG CCGGAGCCGG TCTTCAGCTT TCTCCACAAG
ACGAGGCGAG CTGCGGGTTT TCCGGTACCT GATCAGACGA CCTTCCAGTC CACTCTCCAT
GACCTGAAGC AGCGTCACGC AGTTTCCTTG GTCAGGGGAT TGATGGATGG TTCCGATGGA
TCATCTCATT TAAGCGATGT TCTTGACGCC GAAATTTTGA GCGGGTCACC CTCGTCGTTC
CTTCCTTTGC TCGTTAAGGA GTTTGAGAAG CGCTGCGAAA AGGATCAGTT GAGGATTGCA
GACGAAATAC ACGAAACTAT CGAGAGTTCG AAATCTGGAT CGCTTTCTAA TGCCGCTGCT
GCTTCACGCC TCGGAAATGC GCTCAAAAAA TGGAACCACT ACACGCGGCC AGTTATCGGG
TTTTACAATT GGCGTGGCCA TGCCGAACCT CGAACAAAGA AAATCTTCGA AGAAATGCGG
GAGTACGTCC TTTACCTCAC CAACGTTGAA GGCAGGCTTG ACGAGGCAAA GGAATTGCTT
TTTGCAATAG CTTCATGGCT GGCACATGCT GAAGAGCTAA AGAACCTATC GGAGAAAGAT
CTTTTAGATC TCGAGGGATT GATCAACGAA CGTCAGGAGT TGATGCTTTT CCAGCCATTG
GTTGATGCTT GCGATGCGGC GAAGGCAGCT CACCAGGAAT TTGCTAAGTC TGTGAAGGCG
TACGGGTTGA CAGCGGAAGC CCGGTCTCCT GCAGGTTCTT TCGCGCAAGC GCTTAAGGCT
TACATGGAAG TCGGTGACCC TAATTTGGCG GCTGCAGCAG CGGGTGATCT CGCACTCTTC
TTCAACAACG ACCAGCAGAA ACCGGAAGTC GCTTATATAA TCCTTAGGGG AGTGGATTAC
ATCCTGCAGA AACCTAAGAT CTCGGATGAA ACCAAGGCAC GCTTTACTGA ATATGTAGAG
ACCATCTTCC GCAACTGGAA GATCCCTGAG ATCGAAAAAG AAAAGGGCAA CCTCTCCCGC
ATGACAGCGG TGGTGGAGGC TGCTATGATC ATAGCTCCCG TGGGGGTCAA GCCTGAATTA
GCTGAATTAT ACTCGGTATT AATTGACAAA CGGCGCCAAA ATCGGACGAA ATTTGTCGTC
AGTGTGTTGG TCCTTGCTGT AGTTTTTATT CCGGTAGCAT TCGTCAACTC GAACAAGAGT
CCGTCCTATT CGAGCTCACC CTCTTCGTCC TATAAGCCAT CGTCAACAGT AAACGGCACA
CTTCCGCTCA GTTCTTCAGC TTCAACCAAG GCGTCGAGTG TTGATGACAA GTCAGAATTC
AAGCCATTAC CGAGAGTTGG TGCGACCCTC AACCGATCTG AAATCCGGTA CTGCATTTTT
CAGGGCAAAC GTCTCGATCT TCTGCGAACA ATGGCGCAAT CGAATTCCGC GATAGACAAG
TTCAACGGTC TGGTTGCAGA CTTTAATCTG CGTTGTAGTA ACTTTAGGTA CCGACAGAGC
GACATGACCG CAGTGGAGCT CGAAGCGTCC TCTAATGGTA GTCAATTCAT GCGTGATGCG
GCAACGGTCG CAAAAGGATG GTGA
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| Protein sequence | MQTEEFSLGS NAFNVLGARF QSTAQEIADL VDDAEIGPSR TENVLNKAQQ ALVTPRLRLQ
AELSWLPELS ETQVAKVLDQ SSNTDEEILL QTIANFPDLA KVNVIADMAS RRTITKDALA
AYLNTWKWFE PEPVFSFLHK TRRAAGFPVP DQTTFQSTLH DLKQRHAVSL VRGLMDGSDG
SSHLSDVLDA EILSGSPSSF LPLLVKEFEK RCEKDQLRIA DEIHETIESS KSGSLSNAAA
ASRLGNALKK WNHYTRPVIG FYNWRGHAEP RTKKIFEEMR EYVLYLTNVE GRLDEAKELL
FAIASWLAHA EELKNLSEKD LLDLEGLINE RQELMLFQPL VDACDAAKAA HQEFAKSVKA
YGLTAEARSP AGSFAQALKA YMEVGDPNLA AAAAGDLALF FNNDQQKPEV AYIILRGVDY
ILQKPKISDE TKARFTEYVE TIFRNWKIPE IEKEKGNLSR MTAVVEAAMI IAPVGVKPEL
AELYSVLIDK RRQNRTKFVV SVLVLAVVFI PVAFVNSNKS PSYSSSPSSS YKPSSTVNGT
LPLSSSASTK ASSVDDKSEF KPLPRVGATL NRSEIRYCIF QGKRLDLLRT MAQSNSAIDK
FNGLVADFNL RCSNFRYRQS DMTAVELEAS SNGSQFMRDA ATVAKGW
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