| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3047 |
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| Symbol | |
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| ID | 7388613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2536851 |
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| End bp | 2538404 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643652018 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550202 |
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| Protein GI | 222149245 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4383] Mu-like prophage protein gp29 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.88762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA TCCTCGACCA ATACGGCAAT CCGATCAGCA GCGGCCAGAT CAGACAAGAG
CAGGCGGCAC CTACGGTGAC CGGTGTTCGC CGTCCTGTCG GCAATCATCA GGCACCGGGG
CTGACACCGC CGAAGCTGGC GCGGATCCTC AGGGAGTCGA TCGACGGCGA CCCAGAGCGC
TATCTCGAGC TTGCCGAAGA CATGGAGGAA CGCAACGAGC ATTATGCCGG CGTGCTTGGC
GTTCGAAAGC GCCAGGTCGC GGGCCTGGAG ATTACGGTCG AGGCCGCAAG CGATAGCGCC
GATGATGTCG CAGCGGCCGA TCTGGTGCGT GACGTCATCG GCCGCGACGA TCTTGAAGAC
GAGCTGTTCG ATATACTCGA TGCGGTCGGT AAAGGCTTTT CCGCCACCGA AATCATTTGG
GATACATCCG AGGGCCAGTG GACGATCGAG GCACTGAAGT GGCGCGATCC GCGCTGGTTC
GTGTTTGATC GCGACGATGG TGAGACACTT CGGCTGCGTG GTGCCGCAGG CGATGAGGAT
CTCTGGCCGG CGAAGTGGAT CGTGCACAAA GCCAAGATCA AGTCCGGCCT TCCGATCCGA
GGCGGCTTGG CGCGCTCGGC GGCCTGGGCG TATCTGTTCA AGACCTTCAC GGCGACAGAT
TGGGCGATTT TCTGCGAGGC CTACGGGCAG CCGTTGCGCC TCGGCAAATA TGGCTTGAGC
GCTTCCGAAA AGGACAAGGA AGTCCTGCTG CGCGCCGTCA GCAGCATTGC GGCCGACTTT
GCCGCGACCA TCCCGGAAAG CATGGCGGTC GAGTTCGTAC AGGCTCAGCT CTTCGGCAGC
ATCGATCTTT ATGAGCGGCG CGCCGATTGG CTCGACCGTC AGATCTCCAA GCTCGTGCTT
GGTCAGACCG CGACGACGGA TGCGCAGGCT GGCGGTTATG CCGTCGGCAA GGTGCATGAC
GGCGTGCGTG ACGATATCGA GCGGGCCGAT GCCCGGCAAC TGGCCTCGAC ACTCAACCGC
GACCTCGTCA TTCCGCTGGT CGCGCTCAAT TTGGGCTCGC GCAAAAAATA CCCGAAGATC
CGCATCGGCC GGCCGGATGA AACCGACGTC AATGATCTCG TTGCCAACGT CGTCAAGTTG
GTGCCGCTTG GCCTCAAAGT TGGCATGTCA ACGATGCGTG ACAAGCTGGG TCTGCCGGAT
CCGGACGCGG ACGAGGAGCT GCTCGTGCCA AAGGCGGCAA CGCCGGCACC ATCGTCCGAC
CAGGAAGATG CTCCACCGCC AAAGGTCGCT GCGCAAAGTC AGATGGCGGG GGGCGATCGG
GACGCGATCG ATGTCGCAGC TGCCAAGATC GCGGCCGAGG ATTGGAGGGA AATGACCCCG
CCTGTCGTCG ATGGTTTGGC CGATGCCTTG AGCAAGGTGA CGACGCTGGA GGAAACCCAG
GCGCTCCTGG CAGCCCAGGT GAGCGCCATG GGCGTCAACG CTTTTGTCGA GCAGCTCGCG
CGCGCCGCTT TCTCAGCCAG GATTTCGGGC GAGGCAGATG AGGCGCTCTC ATGA
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| Protein sequence | MAQILDQYGN PISSGQIRQE QAAPTVTGVR RPVGNHQAPG LTPPKLARIL RESIDGDPER
YLELAEDMEE RNEHYAGVLG VRKRQVAGLE ITVEAASDSA DDVAAADLVR DVIGRDDLED
ELFDILDAVG KGFSATEIIW DTSEGQWTIE ALKWRDPRWF VFDRDDGETL RLRGAAGDED
LWPAKWIVHK AKIKSGLPIR GGLARSAAWA YLFKTFTATD WAIFCEAYGQ PLRLGKYGLS
ASEKDKEVLL RAVSSIAADF AATIPESMAV EFVQAQLFGS IDLYERRADW LDRQISKLVL
GQTATTDAQA GGYAVGKVHD GVRDDIERAD ARQLASTLNR DLVIPLVALN LGSRKKYPKI
RIGRPDETDV NDLVANVVKL VPLGLKVGMS TMRDKLGLPD PDADEELLVP KAATPAPSSD
QEDAPPPKVA AQSQMAGGDR DAIDVAAAKI AAEDWREMTP PVVDGLADAL SKVTTLEETQ
ALLAAQVSAM GVNAFVEQLA RAAFSARISG EADEALS
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