| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2972 |
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| Symbol | yci |
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| ID | 7386141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2484913 |
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| End bp | 2485734 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651968 |
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| Product | nuclease |
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| Protein accession | YP_002550153 |
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| Protein GI | 222149196 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.722719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCTA GAAAAGCAGC GGGAGGGGCA AGGCGCGGGG GCGCAAACAA ACGCCGGTCA
TCCGGTGGGA CGAGAGCAAA ACGGACCGGG TCGGGCGGCA GCCTTTGGCC ATGGTTTGGT
GCGCTTGTCG TGGTGGTGGC CGGTGTTTCG GCCTATGACC ACCGCAAGGA ATTGCCGGGA
CTGATCGACA AGACGTTCGG GACCGGTGGC AAATATATCG CGCAATTGCA GGGCCATGCA
CCCCGCGAGA CCAGTAGCCG CAGCGAGACT GGCCCGGTTC CGCCCGCAAG CGTTCCAACG
CCGATGGCCC GCAGGCTTGA TCCGACGCCA CTGCCACCTG CCACGACGAT GATACCGACC
GCATCGATGA TGCCGCGTTC AAGAGATGAC AGTCCCTTGC CGCCCGCCAC CACGCTGGTA
CCGGGACAGG TCGTTGCCTC GCTACAGCCG CGCGGTGTCG ATAAGCAGCG GGTGTCCGGT
AAATTCTACT ATTGCGGCAC GAGCGGGCTC GACAATTGCG TTGTCGATGG CGACACGTTC
TGGGTCAACA AGACCAAGAT CCGGGTTGCC GATATCGATG CGCCGGAAAC TGAACAGGCA
AAATGCAAAT CCGAGCGCGA CCGGGGCTTT GCTGCAAAGG TCCGGTTGCG TGATCTGCTC
AGTGCCGGCA GTTTCGATCT TTCTCCCTTT GGCATGCGGG ATGAAGACCA ATATGGCCGG
AAATTGCGCG TGGTGAGCCG CAATGGTCGT TCACTCGGTG CGATGATGGT CGATGAGGGA
TTGGTCAGGC CCTGGACCGG CCATCGCCAG CCCTGGTGCT GA
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| Protein sequence | MAARKAAGGA RRGGANKRRS SGGTRAKRTG SGGSLWPWFG ALVVVVAGVS AYDHRKELPG
LIDKTFGTGG KYIAQLQGHA PRETSSRSET GPVPPASVPT PMARRLDPTP LPPATTMIPT
ASMMPRSRDD SPLPPATTLV PGQVVASLQP RGVDKQRVSG KFYYCGTSGL DNCVVDGDTF
WVNKTKIRVA DIDAPETEQA KCKSERDRGF AAKVRLRDLL SAGSFDLSPF GMRDEDQYGR
KLRVVSRNGR SLGAMMVDEG LVRPWTGHRQ PWC
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