Gene Avi_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2961 
Symbol 
ID7386133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2475617 
End bp2476099 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID643651960 
Productacetyltransferase protein 
Protein accessionYP_002550145 
Protein GI222149188 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCA GACCTTCGAC CTCTCTTGAT GCACAAGGGA TGAGCGATGC CCTGAACGAG 
ATTTTTGCAG CAGGCTTGCG CAAAAGTGCT GGTGATCCGC AATTGGTGCT GGCGAACTAT
ATTGAGCACA AGGACCGTAT CGAGTGCTCA GTCGCGCAGG ATGATGAGGG CCGTATTTTC
GGCTTTCAGT CACTACGATT TGCGACTGTG GATAATCCCT ATGGCACGCC AGAGGGGTGG
GGCATCATCG GCACGCATAT CAGTCCGCTT GCGGCCAGAA GAGGCATTGG TTCGGCCCTG
TTCCGCGCAA CATTGCAGGC CGCAAAGAGT TTTCCGTTGG ATAATATTGA AGCCGCGATT
GGTGCCGATA ACGAAGCAGG CTTGGCTTAC TATGAGGCAA TGGGTTTTCG GACCTATCGC
TCTTCAGAAG TGACGATTTG CAAGGTGTAT CGTATCGAGG CTGATGCGCA TAAGCCTGTT
TGA
 
Protein sequence
MLIRPSTSLD AQGMSDALNE IFAAGLRKSA GDPQLVLANY IEHKDRIECS VAQDDEGRIF 
GFQSLRFATV DNPYGTPEGW GIIGTHISPL AARRGIGSAL FRATLQAAKS FPLDNIEAAI
GADNEAGLAY YEAMGFRTYR SSEVTICKVY RIEADAHKPV