Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2961 |
Symbol | |
ID | 7386133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2475617 |
End bp | 2476099 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643651960 |
Product | acetyltransferase protein |
Protein accession | YP_002550145 |
Protein GI | 222149188 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAATCA GACCTTCGAC CTCTCTTGAT GCACAAGGGA TGAGCGATGC CCTGAACGAG ATTTTTGCAG CAGGCTTGCG CAAAAGTGCT GGTGATCCGC AATTGGTGCT GGCGAACTAT ATTGAGCACA AGGACCGTAT CGAGTGCTCA GTCGCGCAGG ATGATGAGGG CCGTATTTTC GGCTTTCAGT CACTACGATT TGCGACTGTG GATAATCCCT ATGGCACGCC AGAGGGGTGG GGCATCATCG GCACGCATAT CAGTCCGCTT GCGGCCAGAA GAGGCATTGG TTCGGCCCTG TTCCGCGCAA CATTGCAGGC CGCAAAGAGT TTTCCGTTGG ATAATATTGA AGCCGCGATT GGTGCCGATA ACGAAGCAGG CTTGGCTTAC TATGAGGCAA TGGGTTTTCG GACCTATCGC TCTTCAGAAG TGACGATTTG CAAGGTGTAT CGTATCGAGG CTGATGCGCA TAAGCCTGTT TGA
|
Protein sequence | MLIRPSTSLD AQGMSDALNE IFAAGLRKSA GDPQLVLANY IEHKDRIECS VAQDDEGRIF GFQSLRFATV DNPYGTPEGW GIIGTHISPL AARRGIGSAL FRATLQAAKS FPLDNIEAAI GADNEAGLAY YEAMGFRTYR SSEVTICKVY RIEADAHKPV
|
| |