| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2951 |
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| Symbol | |
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| ID | 7386126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2467255 |
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| End bp | 2468313 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651953 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002550138 |
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| Protein GI | 222149181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCC TCAGGATCGC AGCGGTCAGC AAGAGTTTCG CTGCCAATAC CGTCGTCAAG
GAATTCGATC TCCCGGTGAA TAAAGGCGAG TTCATCTCCT TCCTGGGACC GTCCGGCTGC
GGCAAGACAA CCGTTCTGCG CATGGTGGCC GGGTTTGAAA CGCCCTCCTC CGGCTCGATT
GTCATCGACG GACAGGATGT AACGAAACTG CCGCCCAATC GCCGCCGGAT CGGCATGGTC
TTCCAGGCCT ATGCGCTGTT TCCCAATATG AATGTGTTCG ACAACGTCGC CTTCGGCCTG
AAGATCGCCA AAAAGCCCAA AGCGGAAATC CATAGCCGGG TGATGGAAAT GCTGAAGCTG
ATCCATCTCG ATCATCTGGC CGAGCGCTAT CCCTACCAGA TGTCCGGCGG CCAGCAGCAG
CGCGTCGCGC TGGCCCGGGC GCTGGCGCCA AAGCCGCAGG TTTTGCTACT GGACGAGCCG
CTATCGGCGC TGGATGCCAA GATCCGCGTC TCGCTACGCG AAGAAATCCG CCAGATCCAG
CGCCAGCTCG GTATCACCAC CGTGTTCGTG ACCCATGACC AGGAAGAGGC TCTGTCGATT
TCCGACCGGA TCGTGGTGAT GAACGGCGGA CGCGCCGACC AGATCGGTAC ACCCTCCGAG
ATCTACAATC ATCCCCAGAC CCGATTCGTC GCCTCCTTCG TCGGCACGCT CAACCTGATC
GAAGCGAAAG TGACGGACAC ATCGAGCAAT ACGATCCTGA TCGGCGACCA GCAGATCAGC
CTGAAAAAGC CGCTGGGCAA GGCCAATGGC GAAACCGTCA CCGTGGCGCT GCGCCCGGAA
GCCGGATCGC CTGCCGAAGG CGCCAAGGGG GATGTTCGGA TCAGCGGCAA AGTTACCTCA
AGCCATTTTC TCGGCTCGGT GATCCGCACC CGGCTGGATG TCGGCGGCGC CACGCTGTCC
TTCGACATGT TCAACGATCC GGGCGTTACG CCGGCAGTGA TTGGCGAAAC TGTCACCCTG
AAATTTGCAG GTGACGATCT GATGGTGGTG GCGGATTGA
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| Protein sequence | MSFLRIAAVS KSFAANTVVK EFDLPVNKGE FISFLGPSGC GKTTVLRMVA GFETPSSGSI
VIDGQDVTKL PPNRRRIGMV FQAYALFPNM NVFDNVAFGL KIAKKPKAEI HSRVMEMLKL
IHLDHLAERY PYQMSGGQQQ RVALARALAP KPQVLLLDEP LSALDAKIRV SLREEIRQIQ
RQLGITTVFV THDQEEALSI SDRIVVMNGG RADQIGTPSE IYNHPQTRFV ASFVGTLNLI
EAKVTDTSSN TILIGDQQIS LKKPLGKANG ETVTVALRPE AGSPAEGAKG DVRISGKVTS
SHFLGSVIRT RLDVGGATLS FDMFNDPGVT PAVIGETVTL KFAGDDLMVV AD
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