| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2950 |
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| Symbol | |
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| ID | 7386125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2466407 |
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| End bp | 2467258 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651952 |
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| Product | ABC transporter |
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| Protein accession | YP_002550137 |
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| Protein GI | 222149180 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.507448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC CCTTTCCGCT GGTCTCGACC GTCATCGTCC TTATCGCTGC CGCCTATTTC
CTTGTTCCGC TCTATGCGAC CTTCCAGTTT TCGCTGCAAA TGCTGCGGGG CCAATGGAGC
TTTGCCGCTT ACCGTTCGGT GTTTTCCAGC GACGAGTTTC TGTCTACCCT TGGCTACTCA
GCCTTTGCCT CCCTGATGGC CATTGTCGTT GGTGCCGTCA TCGTCGTGCC CACCGCCTAT
TGGGTACGGC TGCGGCTGCC GAAACTGCGG CCCATCGTTG AGTTCGTCAG CCTCCTGCCG
CTGATCATTC CGCCCGTCGT CCTGGTCTTC GGTTATATCC GGCTGTTCGG CTCCAATTCC
TATCTGCCGC TCACCATGTC GGAAAACGGC ACCAATATCC TGCTGGTGAT TGGCTATGTC
ACATTGTCCT TGCCCTATAT GTTTCGGGCC GTCGACAATG GCATGGCCGC CATCGACATC
ACCACCCTGA CGGAAGCCGC CGAAAGCCTT GGCGCATCGC GGCTGCGCAC CATTGCCGAG
GTGATTTTCC CCAATGTCCG CTCGGCCATC GTCTCAGGCG CCTTTCTGAC CTTTTCGATC
TCGCTGGGCG AATTCGTCTT CGCCAGCCTG CTCAATCGCC CGGCCTTCGG CCCCTATATG
GTCAAGATGG GCCAAGACCG CGCCTATGAA CCGGCAGCGC TCGCCGTTCT GTCCTTCGCG
CTGACCTGGG GCTGCATGGT CCTCATGCAA TTATTCGCCA ATAAAAAACC CGGACAGCGC
TGGTTGCCAC GCCGTATGAC ACGCCAGGCC CCGATGTCCT CTTCCATGCC CCCAAGGAGT
GCAACCCGAT GA
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| Protein sequence | MKKPFPLVST VIVLIAAAYF LVPLYATFQF SLQMLRGQWS FAAYRSVFSS DEFLSTLGYS
AFASLMAIVV GAVIVVPTAY WVRLRLPKLR PIVEFVSLLP LIIPPVVLVF GYIRLFGSNS
YLPLTMSENG TNILLVIGYV TLSLPYMFRA VDNGMAAIDI TTLTEAAESL GASRLRTIAE
VIFPNVRSAI VSGAFLTFSI SLGEFVFASL LNRPAFGPYM VKMGQDRAYE PAALAVLSFA
LTWGCMVLMQ LFANKKPGQR WLPRRMTRQA PMSSSMPPRS ATR
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