Gene Avi_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2938 
Symbol 
ID7386117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2456342 
End bp2456677 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID643651944 
Producthypothetical protein 
Protein accessionYP_002550129 
Protein GI222149172 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA GGCCGATCAA CGAGGAATAT TCCGTCAGCG GTCAGATCAG TCTGGATGAT 
CTGGATGATA TCAAGGCGCT GGGTTTCAAA TCCATCGTTT GCCATCGTCC GGATGGCGAA
GAGCCCGGCC AGCCGGATTT TGCCGCTATT GCTGCGCGGG CCGAAGAACT TGGGCTTGCC
ATCCGCCATA TTCCGGTTGG CCCGATGGGT GTCACGCCGG ATGCCGTCGC CGCCATGGTT
GATGCGCTTG ATGATCTGGA GCGCCCGATG CTCGGCTATT GCCGTTCCGG CGCCCGCTCT
ACGGCGACCT ACGAACACAG CCTGCGCCAG CGCTAA
 
Protein sequence
MNIRPINEEY SVSGQISLDD LDDIKALGFK SIVCHRPDGE EPGQPDFAAI AARAEELGLA 
IRHIPVGPMG VTPDAVAAMV DALDDLERPM LGYCRSGARS TATYEHSLRQ R