Gene Avi_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2936 
Symbol 
ID7386116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2455925 
End bp2456266 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content58% 
IMG OID643651943 
Producthypothetical protein 
Protein accessionYP_002550128 
Protein GI222149171 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA AGCGTATCGA GCCCGGCAAG CGTATGAGCG GTGCTGTCGT TCACGGCAAT 
ACCGTCTATC TGGCTGGCCA GGTCGGCGAA GGCACTGGTG TCACCGAACA GTCCAAATCG
GCGCTGGCCG AAGTGGATCG CCTGCTGGCC GCTGCCGGTT CCGACAAGTC GAAGATCCTG
CAAACCATCA TCTACCTCTC CGACATGTCC ACCTTCGCCG AAATGAACGC TGTCTGGGAA
GCATGGATCG ACCCCGCCAA CCCACCAGCC CGCGCCACCA GCGAAGCTGC TTTGGCAACC
CCGGATTACA AGGTTGAGTT TATCGTAACG GCTGCGATTT AA
 
Protein sequence
MSIKRIEPGK RMSGAVVHGN TVYLAGQVGE GTGVTEQSKS ALAEVDRLLA AAGSDKSKIL 
QTIIYLSDMS TFAEMNAVWE AWIDPANPPA RATSEAALAT PDYKVEFIVT AAI