| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2933 |
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| Symbol | iivG |
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| ID | 7386113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2453144 |
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| End bp | 2454796 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651940 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_002550125 |
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| Protein GI | 222149168 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA CCGGCGGACA ATTGATCGTT GAAGCCCTGA AGGCCAATGG CGTCAAGCGC
GTTGCCTGCG TGCCGGGCGA AAGCTATCTG GCGGTGCTGG ATGCGCTGGT CGATAGCCAG
ATTGAAACCG TCGTCTGCCG CCAGGAAGGC GGCGCGGCGA TGATGGCCGA TTGCTGGGGG
CGTCTCACTG GCGAGCCCGG CATTTGCATG GTGACGCGCG GTCCAGGCGC CACCAATGCT
TCGGCGGGCC TGCATATCGC CCGGCAGGAT TCGGTGCCGA TGATCCTGTT CATTGGCCAG
GTCGCACGCG ACATGCGCGA ACGCGAGGCC TTTCAGGAGG TGGAATATCG CCGCGCCTTT
ACCGAATTTG CCAAATGGGT CGGCGAGATC GATGACGTCG CCCGCATCCC GGAATTTGTC
AGTCGCGCCT TTGCCGTGGC CACATCGGGC CGTCCCGGCC CCGTGGTGCT GACCCTGCCG
GAAGATGTGC TGGTGGAAGA GGCGGATGCG CCAGACGCCC GCCCCTATAT GCCGGTGGAC
GCGCATCCCG GCCCTAGCCA GATTGCCGCG CTTGGCGCAA TGCTGGAGAA GGCGGAGCGT
CCGCTGGTCA TCCTCGGCGG CACCCGCTGG GACGAGGCCT CAGTGAAGGC GTTTGAAGAT
TTTGCCGCAC AGTGGAAACT GCCGGTCGGC TGCTCCTTCC GCCGCCAGAT GCTGTTTGAT
CATCTGCACC CCAATTACGC GGGCGATGTC GGCATCGGCA TCAATCCGGC GCTTGCGAAA
GAGGTGAAGG ACGCCGATCT GATCCTGTTG CTGGGCGGTC GTTTTTCAGA AATGCCATCG
TCATCCTACA CGCTGATGGA CATCCCCTAC CCCAAACAGA AGCTGGTGCA TGTCTATCCC
GACCCGTCGG AGCTTGGTCG CGTCTATCGC CCTGATCTGG CGATCTGCGC CAGCCCGAAG
GATTTTGTCG CCGCTTTGAC TGATCTAAAA GCACCCGCCT CGCCAGTTTG GGCCGAGCGG
ACAAAAGCCA TGCACGCTCA TTATCTGACC TGGTCCACCC CGCCCAAGAC TGGCCCCGGC
ACGGTGCAGA TGGGACCGAT CATGGAGTGG ATCGAAGCCA ATACCGCGAA AGACGCTATC
TTCACCAATG GCGCCGGTAA TTACGCCACA TGGCTACACC GCTTCCATCG TTTTCAGGGC
TACAACACGC AGGCCGCCCC CACTTCCGGC TCGATGGGCT ATGGCCTGCC CGCCGCCGTG
GCCGCTAAGG CGCAGTTTCC CGAACGTGAA GTCATCTGCT TTGCCGGTGA CGGCTGCTTT
ATGATGCACG GGCAGGAATT CATCACCGCC GTGCGCTACA ATCTTCCGAT CATCGTGCTT
TTGATTAACA ACAGCACCTA TGGCACCATC CGCATGCATC AGGAGCGCGA ATATCCAGGC
CGAGTCAGCG CCACCGATCT GGTCAACCCG GATTTCAAAG CCTTTGCGCA GGCCTATGGC
GGTCATGGTG AATTGGTGGA AAAGACTGAG GATTTCGCGG CGGCGTTTGA GCGCGCACGG
GCCTCGGGCA AACCATCGAT CATCGAAATC AAGCTGGACG CGGAAGCGAT TACGCCGACC
CGCACCTTGA CTCAAATTCG CGAGAAAAGC TGA
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| Protein sequence | MKRTGGQLIV EALKANGVKR VACVPGESYL AVLDALVDSQ IETVVCRQEG GAAMMADCWG
RLTGEPGICM VTRGPGATNA SAGLHIARQD SVPMILFIGQ VARDMREREA FQEVEYRRAF
TEFAKWVGEI DDVARIPEFV SRAFAVATSG RPGPVVLTLP EDVLVEEADA PDARPYMPVD
AHPGPSQIAA LGAMLEKAER PLVILGGTRW DEASVKAFED FAAQWKLPVG CSFRRQMLFD
HLHPNYAGDV GIGINPALAK EVKDADLILL LGGRFSEMPS SSYTLMDIPY PKQKLVHVYP
DPSELGRVYR PDLAICASPK DFVAALTDLK APASPVWAER TKAMHAHYLT WSTPPKTGPG
TVQMGPIMEW IEANTAKDAI FTNGAGNYAT WLHRFHRFQG YNTQAAPTSG SMGYGLPAAV
AAKAQFPERE VICFAGDGCF MMHGQEFITA VRYNLPIIVL LINNSTYGTI RMHQEREYPG
RVSATDLVNP DFKAFAQAYG GHGELVEKTE DFAAAFERAR ASGKPSIIEI KLDAEAITPT
RTLTQIREKS
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