| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2925 |
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| Symbol | metF |
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| ID | 7386105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2441259 |
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| End bp | 2442176 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651932 |
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| Product | methylenetetrahydrofolate reductase |
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| Protein accession | YP_002550117 |
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| Protein GI | 222149160 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.760958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACACA CATCTTCCAA AAGAGATCAG GCACGGCCCT TCAAGCTGTC CTTTGAATTC
TTCCCGCCGA AATCCGAGGA GATGGAAGCT CAGCTCTGGG CAACGGTCGA TGAGCTGACC
GGCTGGGCGC CGGAATTCGT CTCGGTTACC TACGGCGCTG GCGGCACCAC CAAGGCGCCG
ACCCTGGCCG CTGTGCGCCG CTTGCTGGCG GAAACGCCAC TCGCCACCGC ATCGCATCTC
ACATGCGTCG GTGCGACACG CGAGGAAATC GCCCAGGTGG TCGAAGACTT TCGGGCGGTT
GGCGTCAAGC ATTTCGTGGC GCTGCGTGGC GATCCACCGA CCGGTGTCGG TTCGGCCTAT
CAACCCCATC CGGGTGGTTT TGAGAATGCG GCAGCCTTGG TGAAGGGCTT GAAAGAGCTT
GGAGATTTCG AGATCTCTGT CTCCGCCTAT CCGGAAAAGC ATCCGGAAAG CGCCGATCTC
GCTATGGATC TCGACATGTT GAAACGCAAG GTCGACAATG GCGCGACCCG GGCGCTCACC
CAATTTTTCT TCGATAACGA TATTTTCGAA CGCTATCTCG ACAAGGTACG GGCCGCCGGG
ATCAGCATTC CTATCGTGCC GGGCATCATG CCGATCCTCA ACCTCACCCA GTTGAAGCGC
TTTGCTGGAA TGTGCGGCAC ATCCGTTCCC GCCATGCTGG ACCAGCGTTT CGAAGGGCTG
GACGACAAAC CCACTGAGCG CGCCAGTGTC GCTGCGGCAC TGGCTGCCGA GCAGATCGCC
GACCTGCAGG CGCGCGGTAT CGACGAATTC CATATCTATA CGATGAACCG GGCCCCGCTG
GTCAATGCCA CGCTGGAACG GCTGGGATTG CAGCGCTCTG ATACCGCAGC CGCCGACCGG
GCAGGGGTTG TGGCGTAA
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| Protein sequence | MAHTSSKRDQ ARPFKLSFEF FPPKSEEMEA QLWATVDELT GWAPEFVSVT YGAGGTTKAP
TLAAVRRLLA ETPLATASHL TCVGATREEI AQVVEDFRAV GVKHFVALRG DPPTGVGSAY
QPHPGGFENA AALVKGLKEL GDFEISVSAY PEKHPESADL AMDLDMLKRK VDNGATRALT
QFFFDNDIFE RYLDKVRAAG ISIPIVPGIM PILNLTQLKR FAGMCGTSVP AMLDQRFEGL
DDKPTERASV AAALAAEQIA DLQARGIDEF HIYTMNRAPL VNATLERLGL QRSDTAAADR
AGVVA
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