Gene Avi_2920 details

Gene Information

• Locus tag: Avi_2920
• Symbol: mltB
• ID: 7386102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2437714
• End bp: 2438904
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643651929
• Product: lytic murein transglycosylase
• Protein accession: YP_002550114
• Protein GI: 222149157
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2951] Membrane-bound lytic murein transglycosylase B
• TIGRFAM ID: [TIGR02283] lytic murein transglycosylase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.495206
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATATCC TGTCTCGCTT CACGCTCGCA GCCATGTTGA GCGGCCTTAT GGCCGGCACG 
GCCTTTGCCC AGGCACCGCA ATGCGGCGGT GATCTCAGCG CTTTTCTGGC TGGCGTCAAG 
GCGGAAGCTG TTGCCAATGG CGCGTCTGCT GAGGCTGCCG ACAAGGCGCT GGCCGGTGCG 
CAGATCGACC AGAAGGTGCT GGGCCGCGAC CGCGCCCAGG GCGTGTTCAA GCAGACCTTT 
ACCGAATTTT CCACCCGCAC CGTTTCCAAA GGCCGGTTGG ACCAGGGAAA GCAAAAATTG 
CAGCAATATA GCGCGGTCTT CGACCGGGCC GAAAAAGAAT ATGGTGTTGC CCCCGGCGTG 
ATCGCCGCTT TCTGGGCGAT GGAAACCGAT TTCGGCGCCG TGCAGGGCGA TTTTAACACC 
CGCAACGCGC TGGTGACGCT GGCGCATGAT TGCCGCCGCC CGGAACTGTT CCGCCCACAA 
TTGCTGGCGC TGATCACCAT GGTTCAGCAT GGCGATCTCG ACCCCGCCAC CAACACCGGT 
GCCTGGGCCG GTGAAGTTGG CCAGGTGCAG ATGCTGCCCA AGGATATCGT TGCCTTCGGC 
GTCGATGGCG ACGGTGATGG CCATGTGGCG CTGAAATCCA GCTCACCCGA TGCGATCATG 
ACGGCGGCGA AATTCATCCA GCACCTCGGC TTCAAGCGCG GCGAGCCGTG GATTCAGGAA 
GTCACCGTGC CGGACACTCT GCCCTGGGAA AAGAGTGGCT TCGACAGCGG CATGAAGGCG 
GGCGACTGGT TCAAGCTCGG CGTCAAGCCG CGTGATGGCA ATACCAAATT TGCCGATCTG 
GAAGGCGAAC TGGTACTGCC GCAGGGCCGC AAGGGACCGG CCTTCATCAC CTATCCCAAT 
TTCGGCATTT ATCTGGAATG GAACAAGTCG TTTATCTACA CGACCTCTGC CGCCTATTTC 
GCCACCCGCC TGGAAGGTGC CGAGGCCTAT CTGAAGGGCA ACCCGGAACA GGGATTGACC 
GATGTGCAGA TGAAGGAATT GCAGACCAAG CTGAAGGGCC TTGGCTATGA CGTCGGCGAG 
ATCGACGGCA TTCTAGGCGG CGGCACCCGC GACGCCGTGC AAAAGGAACA GCTGAAGCGG 
AATATTCCCG CCGATGGCTG GCCGACGCCA GCGCTGTTGG CAGCACTTTA A 

 

Protein sequence

MHILSRFTLA AMLSGLMAGT AFAQAPQCGG DLSAFLAGVK AEAVANGASA EAADKALAGA 
QIDQKVLGRD RAQGVFKQTF TEFSTRTVSK GRLDQGKQKL QQYSAVFDRA EKEYGVAPGV 
IAAFWAMETD FGAVQGDFNT RNALVTLAHD CRRPELFRPQ LLALITMVQH GDLDPATNTG 
AWAGEVGQVQ MLPKDIVAFG VDGDGDGHVA LKSSSPDAIM TAAKFIQHLG FKRGEPWIQE 
VTVPDTLPWE KSGFDSGMKA GDWFKLGVKP RDGNTKFADL EGELVLPQGR KGPAFITYPN 
FGIYLEWNKS FIYTTSAAYF ATRLEGAEAY LKGNPEQGLT DVQMKELQTK LKGLGYDVGE 
IDGILGGGTR DAVQKEQLKR NIPADGWPTP ALLAAL