| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2919 |
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| Symbol | lyc |
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| ID | 7386101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2436794 |
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| End bp | 2437597 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651928 |
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| Product | glycosyl hydrolase/lysozyme |
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| Protein accession | YP_002550113 |
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| Protein GI | 222149156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTCGC TGGTCCTGGC ACTTATTCCG ATTTGTTTGG CGATGGCGTC CTGCACCTCG
ACGAGCTACG ATTTCATGGA AACCGGCTCG ATCCAGCCAA AATTCCAGGA CAAGGACCCG
CAGGACTTCG GCATCAATTC TCCGCATCGC CATCAGGTGC ACGGCATCGA CGTGTCGAAA
TGGAACGGTA ATATCAACTG GATGCAGGTC CGCCAGTCCG GCGTCTCCTT CGCTTTCATC
AAGGCCACAG AAGGCAAGGA TGTGATCGAT CCGAAATTTG CGGATTACTG GCAGCAGGCC
AATGCCGCTG GCCTGCCCCA TGCGCCCTAT CATTTCTATT ATTTCTGCTC CAGCGCCGAC
GAGCAGGCCG ACTGGTTCAT CGCCAATGTG CCGAAAGCCT CGATGGACAT GCCGCCCGTT
CTGGATGTTG AGTGGAACCA CACGTCCAAG ACCTGCACCA AGCGGCCCCC GGCTGATGTG
GTGCGCAGCG AAATGAAACG CTTCATGGAC CGGCTTGAGG CCTATTACGG CAAACGGCCG
ATTATCTATA CATCGGTCGA TTTTCATAAG GACAATTTGC AAGGCGCGTT CCAGGATCAT
TATTTCTGGG TCCGTGCCGT CGCCAAGCAC CCCTCGGAAA TCTATCCAGA CCGCCGCTGG
GCCTTCTGGC AATATACCTC GACCGGCGTT ATTCCCGGCA TCAAGGGCGA TACGGACATC
AATGTCTTTG CGGGTACCCA GCAAAACTGG CGCAAATGGG TGCAGGCCGT CTCATTGCCG
ACCCAGCAGA CCGCTGCAAA CTGA
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| Protein sequence | MRSLVLALIP ICLAMASCTS TSYDFMETGS IQPKFQDKDP QDFGINSPHR HQVHGIDVSK
WNGNINWMQV RQSGVSFAFI KATEGKDVID PKFADYWQQA NAAGLPHAPY HFYYFCSSAD
EQADWFIANV PKASMDMPPV LDVEWNHTSK TCTKRPPADV VRSEMKRFMD RLEAYYGKRP
IIYTSVDFHK DNLQGAFQDH YFWVRAVAKH PSEIYPDRRW AFWQYTSTGV IPGIKGDTDI
NVFAGTQQNW RKWVQAVSLP TQQTAAN
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