| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2912 |
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| Symbol | |
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| ID | 7386097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2431809 |
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| End bp | 2432915 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651924 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_002550109 |
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| Protein GI | 222149152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.647608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGA AAACGGACCG CACGATTGCC ATCAGCATCA CTGCTGTCAT CGTCGCAGCC
CTTTCCAGTT GCACCAATGT CAATGACAAT TCCAAAGCCG ATATAGCGCC CAAGCCTGCA
TCGGCTCATC AAGCCGTTTC GGCCGCAGCG CAGCCGGGCG TCACACAGCC CGGTGCCAAT
ACCGTAGCAT CGGCAAATGG CAGCGTCGCA ACAGGTGCCT CGACAACGGT AGCTGCCGCA
AATGGCACGA TGACGCCGGC TGTTCCTGGC ACGCAGGCCA TGACACCACC TTCGCAATCG
GCTGTTACTG CGCTTGCCAA TACCGCGTCG GGAAATAATG CGCTGGCCGC CATAAATGGC
GCCTCGGGCA CAGGCCAGAC GGTTAACCTG GCGACAGGCC AAGGCCCATA CCCGATCCAG
AAACCAGGCC TGACGCAGGT CGCCTCGCTT GGACCAACGG TCAGCACCGT GCCTTCTTCC
GCCAATGCAC CAGCCCGGAT TTCGGACAAC GAGCCGATCG GCCTTGAAAA CGAAGCGTTG
CAGCCGGATG TGATGGCCAT GCATTCCGCC GTTCCCACGC CGCGCCCGGG CTCTGCGGCC
TCATCGTCCG TCGCCTATGC CTCACCGGCC AAGCCGGTCG TCAAATCCTT CGCGCTGCTT
GATGCACAAT TCGACACCAG CGCCCCCGGC CCCGTGCCAA GTGCCACGCC GGAAGCCTCC
AAAAGCACCG CGTCTGGCAC AAGCGAAACG GCAAGCCGCG GCCCGACGGT CATCAATGGG
CTCGTCAACA AATATGCCGC CCTATACGGA ATGCCATCCG CGCTGATCCA TCGGGTCATT
CACCGCGAAA GCCGTTATAA TCCGTCGGCC TATAGCCGCG GCAATTACGG GCTGATGCAG
ATCCGCTATA ATACGGCCCG TTCGCTTGGC TATGAAGGTC CGGCAGAGGG TCTGTTCGAC
CCGGAAACCA ACCTGAAATA CGCGATCAAA TATCTGCGCG GTGCGTGGAT GGTGGCCGAA
AACAACAATG ATAACGCCGT TCGCCTCTAT GCCCGTGGCT ATTATTTCGA TGCCAAGCGC
AAGGGCCTGC TGGACGAAGT GCAGTAA
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| Protein sequence | MTAKTDRTIA ISITAVIVAA LSSCTNVNDN SKADIAPKPA SAHQAVSAAA QPGVTQPGAN
TVASANGSVA TGASTTVAAA NGTMTPAVPG TQAMTPPSQS AVTALANTAS GNNALAAING
ASGTGQTVNL ATGQGPYPIQ KPGLTQVASL GPTVSTVPSS ANAPARISDN EPIGLENEAL
QPDVMAMHSA VPTPRPGSAA SSSVAYASPA KPVVKSFALL DAQFDTSAPG PVPSATPEAS
KSTASGTSET ASRGPTVING LVNKYAALYG MPSALIHRVI HRESRYNPSA YSRGNYGLMQ
IRYNTARSLG YEGPAEGLFD PETNLKYAIK YLRGAWMVAE NNNDNAVRLY ARGYYFDAKR
KGLLDEVQ
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