| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2895 |
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| Symbol | murF |
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| ID | 7386085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2417818 |
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| End bp | 2419251 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651912 |
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| Product | UDP-MurNAc-pentapeptide synthetase |
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| Protein accession | YP_002550097 |
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| Protein GI | 222149140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCTTGC TCTGGACCAT TGAAGATCTG GTTGCGGCCA TGACCGGACG CCCGGTCGGC
ACCATGCCGC CGGGCATTAC CGGCATTTCC ATCGATAGCC GCAGCATCCA GCCCGGAGAA
GCCTTCTTCG CTATCAAGGG CGACCGGGTA GACGGGCATG ATTATGCCAG CATTGCTGTG
GCGAATGGCG CGGCGCTGAT GGTGGTCAAT GAGGCCAAAC TGCCCGCGCT TGGCCGGTTG
ACCGTGCCGA TGATCGTTGT TGACGATGTG TTGCAGGCGT TGGGAAGGCT GGCGATTGCC
GCCCGTGCCC GATCGCGCGC CAAGATTGTT GCTGTGACCG GTTCGGTCGG TAAGACGACG
ACCAAGGAAA TGCTGCGCCA GGTGCTGGCA CCGTCAGGCG AAGTGCATGC GGCTGTTGCC
TCCTTCAACA ATCACTGGGG TGTGCCGCTG ACGCTGGCGC GGATGCCCGC CACTGCACAA
TACGGCGTGT TTGAGATCGG CATGAATCAT TCCGGCGAAA TCACTCCGCT GGTGCAGATG
GTCCGCCCGC ATCTAGCTGT TATCACCACC ATTGCGCCTG CCCATCTCGG CAATTTCACC
AGTGTCGATG AGATCGCCGA TGCCAAGGCG GAAATCTTTT CCGGTGTCGC GGCCAATGGC
GGCGTGCTTT TGAACCACGA CAATCCCTAT TTCGAATATC TGGAACACAA GGCGCAGGAA
GCGGGCATCA CCCATATCCA TTCCTTTGGC CAGCATGCCA AGGCGGAATT CCGGCTGGCG
GAATTTGATG GCGCTGCCGA AAGCTCGACC GCCTGGGCGA TCATCGACGG TGAGACCCGT
GAAGTGGTGA TTGCCGCGCC GGGCCGCCAT ATCGCAGAAA ACGCCATGGC GGCGCTGGGC
GCTGCCCGTC TTCTGGGTGC CGATCTGGAT GGTGCGGTCG ATGCATTGAG CAGACTGTCA
CCGGTCAAGG GCCGGGGTGA GCGCCATCGG CTGCGCTGCG CCTCTGGTCT CTTCACCCTG
ATTGATGAAA GCTATAACGC CAATCCGGCT TCCATGCGCG CCGCCATTGC TGTCCTGGCC
GCAGCCCAGC CGCGCGGCGA GGGCCATCGC ATCGCCGTGC TTGGCGATAT GCTGGAAATG
GGCGAGTTTT CCGAGGAGTT GCACGCCGAT CTGGCAGGGC CGTTGCTGGC CGCCGGGATC
GAGCATGTCT GGCTGGCCGG ACCCGCCATG GCAGCACTGC GGGCGCAATT GCCGGAGACC
GTTTCGGTTG CGTCTTTCAA TACCGCTGAA GATCTGGCCG CTTTTGCTGT CGCCTCGGTT
CACGGTGGTG ATGTGGTGAT GGTCAAGTCG TCACTGGGCA TCGGTTTTGG CAAGATCGTC
GCGGCTCTGC TTGACAACTA TCCCCCATTG GACGACACCC GCCGCCCAGA ATAG
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| Protein sequence | MTLLWTIEDL VAAMTGRPVG TMPPGITGIS IDSRSIQPGE AFFAIKGDRV DGHDYASIAV
ANGAALMVVN EAKLPALGRL TVPMIVVDDV LQALGRLAIA ARARSRAKIV AVTGSVGKTT
TKEMLRQVLA PSGEVHAAVA SFNNHWGVPL TLARMPATAQ YGVFEIGMNH SGEITPLVQM
VRPHLAVITT IAPAHLGNFT SVDEIADAKA EIFSGVAANG GVLLNHDNPY FEYLEHKAQE
AGITHIHSFG QHAKAEFRLA EFDGAAESST AWAIIDGETR EVVIAAPGRH IAENAMAALG
AARLLGADLD GAVDALSRLS PVKGRGERHR LRCASGLFTL IDESYNANPA SMRAAIAVLA
AAQPRGEGHR IAVLGDMLEM GEFSEELHAD LAGPLLAAGI EHVWLAGPAM AALRAQLPET
VSVASFNTAE DLAAFAVASV HGGDVVMVKS SLGIGFGKIV AALLDNYPPL DDTRRPE
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