| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2890 |
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| Symbol | murC |
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| ID | 7385998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2411534 |
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| End bp | 2412949 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651907 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_002550092 |
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| Protein GI | 222149135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.529421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGC CGAAGAGCAT CGGTCTGGTG CATTTCATCG GGATCGGCGG GATCGGTATG
AGCGGCATTG CCGAAGTGCT GCACAATCTC GGCCATCGGG TACAGGGATC GGACCAGGCT
GAAAGCGCCA ATGTGCAGCG CTTGCGCGCC AAGGGCATTG AGGTGTTTGT CGGCCACAAG
CCGGAGAACC TGGGCGATGC CGAGGTTGTT GTCGTTTCCA CCGCCATCAA GAAAAGCAAT
CCCGAGCTGG TGGCTGCGCG TGAAAAGCTG CTGCCGGTGG TTCGCCGGGC CGAAATGCTG
GCCGAGTTGA TGCGGTTCCG CAATGCCATC GCCATCGGCG GCACGCATGG CAAGACGACG
ACCACCTCAA TGGTGGCGGC GCTGCTTGAG GCAGGCCAGC TCGACCCGAC TGTGATCAAT
GGCGGTATCA TCAATGCCTA TGGCACCAAT GCCCGCATGG GCGAGGGTGA GTGGATGGTG
GTCGAGGCCG ACGAATCGGA CGGCACCTTC CTGAAGCTGC CCGCCGATGT GGCTGTCGTC
ACCAATATCG ACCCTGAGCA TCTGGACCAT TACGGCAATT TTGACGCCGT GCGGGCCGCG
TTTCGCCAGT TCGTCGAGAA TGTGCCTTTC TACGGTTTTG GGGTCATGTG CCTCGATCAC
CCTGAAGTGC AGGCGCTGGT TGGCCGGATC GAAGACCGCA AGGTTGTCAC CTATGGCGAA
AATCCGCAGG CCGATGTGCG TTTTTTCAAT GTGCGCAACG AAGGCACCAA GTCGATTTTC
GATGTGGAAA TCCGCCGTCG CCGCACGGGC CGTGTCTTTA GCTTCAAAGA CCTGACTCTG
CCGATGCCGG GCCGCCACAA TATTTCCAAT GCCTGCGCGG CGATTGCGGT GGCCAACCGG
CTGGATATTT CCGAGGAAGC AATCCGCAAG GGTCTGTCCA CCTTCGGTGG CGTCAAGCGG
CGCTTCACCC TGACCGGCAC CTGGAATGGC GTGCAGGTGT TTGACGATTA CGGCCACCAT
CCGGTGGAAA TCAAGGCGGT GCTTAAGGCG GCGCGGGAGA GCTGCAAGGG GCGGATCATC
GCCGTGCATC AGCCGCATCG CTTCTCGCGT TTGTCGAGTC TATTCGAGGA TTTCGCCAAT
TGCTTCAACG ATGCCGATAG TATTCTGTTG TCGCCAGTTT ATGCTGCGGG AGAAGATCCC
ATCGAGGGCA TCGATTCTGA GGCGCTGGTG TCGCGCATCC GGTCGGGCGG TCATCGGGAT
GTGCGCTATC TGGCCTCGCC GGATCAGCTG GCCGGAATTA TTTCGACCAT TGCACAGCCG
GGTGATTTTG TGGTCCTGTT GGGGGCTGGA AATATTACAC AATGGGCAGC GGCGCTGCCT
TCAGAATTGC AAGCGCTTTC GGGAAAATCG GAATGA
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| Protein sequence | MKMPKSIGLV HFIGIGGIGM SGIAEVLHNL GHRVQGSDQA ESANVQRLRA KGIEVFVGHK
PENLGDAEVV VVSTAIKKSN PELVAAREKL LPVVRRAEML AELMRFRNAI AIGGTHGKTT
TTSMVAALLE AGQLDPTVIN GGIINAYGTN ARMGEGEWMV VEADESDGTF LKLPADVAVV
TNIDPEHLDH YGNFDAVRAA FRQFVENVPF YGFGVMCLDH PEVQALVGRI EDRKVVTYGE
NPQADVRFFN VRNEGTKSIF DVEIRRRRTG RVFSFKDLTL PMPGRHNISN ACAAIAVANR
LDISEEAIRK GLSTFGGVKR RFTLTGTWNG VQVFDDYGHH PVEIKAVLKA ARESCKGRII
AVHQPHRFSR LSSLFEDFAN CFNDADSILL SPVYAAGEDP IEGIDSEALV SRIRSGGHRD
VRYLASPDQL AGIISTIAQP GDFVVLLGAG NITQWAAALP SELQALSGKS E
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