| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2880 |
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| Symbol | |
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| ID | 7385990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2400234 |
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| End bp | 2401103 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651899 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550084 |
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| Protein GI | 222149127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG TGAAGTCTTC CATGATCAAC AAATCAGCGC GGATGCTTGC CGTTTGCCTG
TCTATCGCCG GCGTTGCGCC GCTGCTCAGC GCCTGCAATA CCGACAAGGA TATCGACATT
ACCAAGCTCG GCGCTGAGAC CGATCCGCCG GAGACGCTCT ATAATCAGGG TCTGGCCAAT
ATCAAGGCGG GCAATCTTGC TGAAGCGTCG CGTAAGTTCG ACGCCGTCGA CAAGCAGAAC
CCGTTCTCAG ACTGGTCGCA GAAGGCGCTT GTCATGAGCA CCTTCGTCAA ATACCGCCAG
GGCAAATATA CCGAGGCCAT CTCGACCGGC ACGCGCTACA TGACGCTGTA TCCGTCGACC
AAGGATTCGG CCTATGTGCA ATATCTGATC GGCCTGTCCA ACTGGCGCCA GATCCCCAAC
GTCACCCAGG ACCAGAAATT CTCGTCCAGA ACGCTTGAGG CGATGGACAA GGTGGTCAAG
AACTATCCTA CGTCTGAATA TGTGTCCGAC GCTCAGGAAA AGATGCGCTT TGCCCGCGAC
CAGCTGGCCG GTAAGGAAAT GCAGATCGGC CGCTATTATC TGGAGCGCAA GGAATACCTG
GCCTCGATCC AGCGGTTCCG CAATGTGGTT GAGCAATATC CGACCACCAA CCAGATCGAG
GAAGCGCTGG CGCGTCTCGT GGAAGCCTAT TATGCCATGG GCGTGGTGCA GGAAGCGCAG
ACGGCCGCTG CCGTGCTCGG TCACAACTAT CCTGACAGCA AATGGTACAA GGATAGTTTC
GAACTGTTGA AAACCGGTGG TCTTGAGCCG CGGGAAGCCC AGGAGAGCTG GATTTCCAGA
GCCGGCAAAA AGATTCTGGG CTCATCCTGA
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| Protein sequence | MSEVKSSMIN KSARMLAVCL SIAGVAPLLS ACNTDKDIDI TKLGAETDPP ETLYNQGLAN
IKAGNLAEAS RKFDAVDKQN PFSDWSQKAL VMSTFVKYRQ GKYTEAISTG TRYMTLYPST
KDSAYVQYLI GLSNWRQIPN VTQDQKFSSR TLEAMDKVVK NYPTSEYVSD AQEKMRFARD
QLAGKEMQIG RYYLERKEYL ASIQRFRNVV EQYPTTNQIE EALARLVEAY YAMGVVQEAQ
TAAAVLGHNY PDSKWYKDSF ELLKTGGLEP REAQESWISR AGKKILGSS
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