Gene Avi_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2868 
Symbol 
ID7385979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2384035 
End bp2384676 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID643651888 
Producthypothetical protein 
Protein accessionYP_002550073 
Protein GI222149116 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.308795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA TCTCCGGATT CCACTGCGAA ATAGCCCAAC CGGATGAAAC CGGCAGCCCA 
ATCGTCATGC TGCATGGCAG CGGCCAAGAT GAAACATGCT GGGGAGACAT TCCGGCACGC 
ATCGGCCCCG GCTCGCCCAT CATCTGTGTG CGCGGCAATA TCATCTGGGA AGGCAAATAC 
GCATTTTTCC GGCGCAATCC GGACAGGACG CTGGATCTGG CCGACCTGGC GCGCTCGGCC 
AGCGAAATCA GCTTGCTGCT CGAAAGCCTG ACGCAACGAT TCGCCGAGCG AAAGCCGATC 
CTGATCGGAT ATTCAAACGG TGCAATTCTC TCCGCAGCCG TTCTTCGCGA TTTTCCGGAT 
TTGATCGAGG GCGCCATCCT GCTGCGGGGC TTATCACCGG CTCCGGCTTT CCCCTTTCCT 
CGGTCCGTGA CCTGTCCGGT GCTGGTCATA TCAGGCGAAA CCGACAGCCG TCGCACCCCT 
CAGGACGGCG CGGTCCTCGC GTCGCAACTC GTGGCAGCCG GGGCGCCGAC CTCCTATCAT 
CTTTTGCCCT GCGGCCATGG CTGGGACCCG CAGGAACGGG ATCTGGCCTT GATTCAGGAC 
TGGCTGCGAC ATGTGACAAG ACGCGCCGTG CCCGGCTCCT GA
 
Protein sequence
MSKISGFHCE IAQPDETGSP IVMLHGSGQD ETCWGDIPAR IGPGSPIICV RGNIIWEGKY 
AFFRRNPDRT LDLADLARSA SEISLLLESL TQRFAERKPI LIGYSNGAIL SAAVLRDFPD 
LIEGAILLRG LSPAPAFPFP RSVTCPVLVI SGETDSRRTP QDGAVLASQL VAAGAPTSYH 
LLPCGHGWDP QERDLALIQD WLRHVTRRAV PGS