Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2855 |
Symbol | |
ID | 7385971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2374426 |
End bp | 2376273 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651880 |
Product | aminopeptidase P |
Protein accession | YP_002550065 |
Protein GI | 222149108 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.151191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCAAA GTTTTGACGT TACCTCCACT CCTCAATTCG GTCGCGACCG TGTCGCGGCG CTGCGTGACC GGTTTTCGGG GCTGGGTATC GATGGTTTTC TGATCCCGCG GGCCGATGAA TATCAGGGCG AATATGTTCC AGCCTCAGCC GAACGCCTGT CCTGGCTGAC CGGCTTTACC GGCTCGGCGG GCGAAGTTCT GGTAACGCAG AGCCAGGCCG TGGTCTTTGT CGATGGCCGC TATGTCACGC AAGTGCGCCA GCAGGTGGAT CTCGACGTGT TTACGCCGGG CGACCTGATC GATGAGCCTC CAGCCAAGTG GATCCCGGCA CATGCACCGA AGAGCTTCCG TTTGGGCATC GATCCATGGA TGCATACGGT GGCGCAGGTG TCGCGGCTGG AGAAGGCGCT GAACGAGATC GGCGGCACGA TTGTGCTGGT CGATGAAAAT CCGCTCGATG CTGTCTGGAC CGACCGTCCT GCCGAGCCGT TGGGCGCAGT ATCTATCCAG CCGATCTCGG CCGCCGGGGT CGAGGCAGGT GAGAAGATTG CCAAAATCGC CGATGGCCTC GCAGCAAAAG ACGTAGCGGC GGTGGTGATC ACCGATCCAT CGTCGGTGGC CTGGATCTTT AATATTCGTG GCCAGGATGT ACCTCACACG CCGCATCCGC TGTCGCGGGC GATCATTCAT GCCGATGGCA AGGCCGAACT GTTTCTGGAC CGGCGCAAGA CGAACCTTGA GGTCGAGACC TATCTCGATG GTCTTGCCAC CCGGCTTGAT CCGCAGAATT TCGTGTCGCA ATTGGCAATG CTGGCCCAGA CCGGCGCCCG TATTCTCATG GACCCTGATC TCTCGCCCGC TGCACTGGCG CGTCTGGTGG CGAGCCGGGG TGGCAAGGTT GTGGATGGTG CCGATCCGGC CAAGCTTGGC CGGGCGGTGA AAAACCTGGT TGAGCTGAAT GGCTCGGCTG TCGCCCATGT ACAGGACGGC GTGGCCGTGG TCGAATTCCT CAGCTGGCTC GACCGGCAAC CGGCGGGCAG CGCGACGGAA ATCAGTGCGA CGCGGGCGTT GGAAACCATC CGGGCCAAAG TGGGCGAGCG GATGCAGAAC CCGCTGAAGG ATGTGTCCTT CGATACGATT GCCGGGGCAG GCGAACATGC CGCGATCATG CATTACCGCG TAACGACGGA AAGCGACCGG CCGATCCGGG CAGGCGAAAT GTTCCTGGTC GATTCAGGCG CGCAATATGT CAACGGCACC ACGGATATAA CCCGCACGCT TGCGGTCGGC GCGGTGCCGG ACGATCAGAA ACGGTTCTTC ACGCTGGTGT TGAAGGGCAT GATCGCCATC AGCACGGCGC GTTTTCCCAA GGGCACGCGC GGCTGCGATC TCGATCCGCT GGCACGCATC AACCTGTGGA AGGCCGGGGC GGATTTCGCC CATGGCACCG GCCACGGTGT CGGCTCGTTT CTGTCCGTGC ATGAGGGACC GCAGCGGATT TCCCGGCTTT CCACCCAGGA ATTGCTGCCA GGCATGATTC TCTCCAATGA GCCTGGTTAC TACCGGCCCG GTCATTTTGG CATCCGGATC GAAAACCTGA TCTATGTGCG CGATCTGGAG CCGGTGAACG GCGGCGACCT TGATATGATG AGTTTCGAGA CGCTGACCTT CGCGCCCATC GACCGCTACC TGATCGTTGA GGACATGCTG ACACGTGAGG AGCTGCGCTG GCTGGACGAT TACCACGCCC GCACACGAGA GCAGCTTTTG CCGCTGGTGG AGGGTGACGA TGCCCGAAGC TGGCTGATCC GGGCAACCGA GCCACTGGCG CGGTCCGCTG CTGCATAA
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Protein sequence | MFQSFDVTST PQFGRDRVAA LRDRFSGLGI DGFLIPRADE YQGEYVPASA ERLSWLTGFT GSAGEVLVTQ SQAVVFVDGR YVTQVRQQVD LDVFTPGDLI DEPPAKWIPA HAPKSFRLGI DPWMHTVAQV SRLEKALNEI GGTIVLVDEN PLDAVWTDRP AEPLGAVSIQ PISAAGVEAG EKIAKIADGL AAKDVAAVVI TDPSSVAWIF NIRGQDVPHT PHPLSRAIIH ADGKAELFLD RRKTNLEVET YLDGLATRLD PQNFVSQLAM LAQTGARILM DPDLSPAALA RLVASRGGKV VDGADPAKLG RAVKNLVELN GSAVAHVQDG VAVVEFLSWL DRQPAGSATE ISATRALETI RAKVGERMQN PLKDVSFDTI AGAGEHAAIM HYRVTTESDR PIRAGEMFLV DSGAQYVNGT TDITRTLAVG AVPDDQKRFF TLVLKGMIAI STARFPKGTR GCDLDPLARI NLWKAGADFA HGTGHGVGSF LSVHEGPQRI SRLSTQELLP GMILSNEPGY YRPGHFGIRI ENLIYVRDLE PVNGGDLDMM SFETLTFAPI DRYLIVEDML TREELRWLDD YHARTREQLL PLVEGDDARS WLIRATEPLA RSAAA
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