| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2849 |
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| Symbol | nadB |
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| ID | 7385967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2370402 |
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| End bp | 2372009 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651876 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_002550061 |
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| Protein GI | 222149104 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTTT CAGACGGGAT TGAGGATTAT TACGACGTCC TGGTGATTGG CGCCGGATTG
GCGGGGCAGA CGCTGGCATT ATCTGTGGCG CGGGAGAAGC GGGTTCTCAT CGTCTGCAAA
TCCGATCTCG GCTCTGCCGC ATCGAATTAT GCCCAGGGTG GCATCTCTGC GGTCTATGCG
GCAGACGATA CGCATGACAA GCATGTCAGC GATACGCTGA TTGCCGGATG TCATCTGAAT
GACATCGACA ATACGCGCTA TATCGTTGAG AATGGCCGTA AGGCCGTCGA GTGGCTGATC
GAACAGGGTG TTCCATTCAC CAAACAGGAT GGCGACTATC ACCTGACCCG CGAAGGCGGC
CATGGCGAAC GGCGCATTTT GCATGTCGAT GACATGACCG GTCGCGGAAT TCAGACCAGC
CTGTCCTCCC ACCTTCTATC TCATCCCAAC ATCACCGTGC TTGAGAATTG CGCAGTCACG
GATCTCATCC GGGGCGACGC CGAGAAAAAC ACCTGCATTG GCGCGGTGTT GATCGACCCG
AAGGGTGTCG AGCGCCGCGT TGCGTCCAGT TTCACGGTTT TGGCCACAGG CGGCGTCGGC
CCGATTTTCT CGCATACGAC ATCGCCAGCT CAATCGATCG GTGACGGTAT TCCTCTGGGC
TGGAGAATGG GTTGCCGTGT CGCCAACCTG GAATTCATGC AGTTTCATCC AACCTGCATG
TACTATCCGG GAGGTGACGC TTTTCTGATC ACGGAGGCCG TTCGGGGCGA GGGCGGCATT
CTGACGCTTC CCGATGGCTA CCGCTTCATG CCCGATTATG ATGAGCGTGC AGAGCTTGCG
CCGAGAGATG TGGTCTCCAG AGCCATTTAC AGCGAGATGA AGAAAAACGG CATTCCATCC
GTCAATCTCG ACATCAGCCA TAAGCCAGCG GAATTCATCA AGGGTCATTT CCCGAACATC
TACCAGAAAT GTCTGGAGCG GGGGATCGAC ATGACGAAGG AGTCGATCCC GGTGACGCCC
GCTTCGCATT ATACCTGCGG CGGTGTCTAT GCGGAGATAA ACGGACGAAC CGATGTTGAT
CGCCTATATT GCCTCGGTGA GGCGGCCTAT ACCGGCTTGC ATGGCGCCAA CCGGCTGGCA
TCCAACTCCC TGCTGGAATG TGTGGTCATG GCACGGGCCG CGTCATTGGA TATCTTGAGC
GGCAGCGACC TGCCGAATGT CTCGCTGGCA CCGGCCAAGC AGCACCCGCA TATCATGGCG
GCGGACGGAA TGAAGCGTGA TGCCATGGTT CTGATCAAGC AGGAAATCAG AACGGTGATG
TGGAATTATG TGGGCATCGT TCGCAGTCAG GACTCGCTTC ATGCGGCCCG CAGAAGGATT
GACCTGCTTC ATTCGGAAGT CGAGGCGATG TTGACATCGC ATCCCCACTC TTTCGACCTT
AGCGACTTGC ACAACATGGT GGTGACGGCG CGGATTGTCA TCGACAGCGC CTTGTCGCGG
TCTGAAAGTC GCGGCTGTCA TTACAACAGC GACTTTCCAA ATTCTCGTCA GGAGTCCGGC
CCGACCGTCC TCTGCTTGGC AGACCAACAC GCCAGCGTCG CGGCATAG
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| Protein sequence | MMFSDGIEDY YDVLVIGAGL AGQTLALSVA REKRVLIVCK SDLGSAASNY AQGGISAVYA
ADDTHDKHVS DTLIAGCHLN DIDNTRYIVE NGRKAVEWLI EQGVPFTKQD GDYHLTREGG
HGERRILHVD DMTGRGIQTS LSSHLLSHPN ITVLENCAVT DLIRGDAEKN TCIGAVLIDP
KGVERRVASS FTVLATGGVG PIFSHTTSPA QSIGDGIPLG WRMGCRVANL EFMQFHPTCM
YYPGGDAFLI TEAVRGEGGI LTLPDGYRFM PDYDERAELA PRDVVSRAIY SEMKKNGIPS
VNLDISHKPA EFIKGHFPNI YQKCLERGID MTKESIPVTP ASHYTCGGVY AEINGRTDVD
RLYCLGEAAY TGLHGANRLA SNSLLECVVM ARAASLDILS GSDLPNVSLA PAKQHPHIMA
ADGMKRDAMV LIKQEIRTVM WNYVGIVRSQ DSLHAARRRI DLLHSEVEAM LTSHPHSFDL
SDLHNMVVTA RIVIDSALSR SESRGCHYNS DFPNSRQESG PTVLCLADQH ASVAA
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