Gene Avi_2845 details

Gene Information

• Locus tag: Avi_2845
• Symbol: pncA
• ID: 7385963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2367241
• End bp: 2367867
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643651872
• Product: pyrazinamidase/nicotinamidase
• Protein accession: YP_002550057
• Protein GI: 222149100
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGG CGCTGCTTCT CATTGATATC CAGAACGGCT TTTGCCCGGG CGGCAATCTG 
CCGGTGGCAG AGGGCGATCA GATCGTTCCC ATCGCCAATG CCCTAATGGC CAGCGGGTCC 
TATGACCTGA TCGTCGCCTC GCAGGACTGG CATCCGGCCA ATCACGGCAG CTTCGCCTCC 
CAGCATCCCG GCGCCAAGGT TTTCGAACTG GGCGAGCTTT CCGGCAAGCC GCAAATGATG 
TGGCCGGACC ATTGCGTACA GGGGACAGTG GATGCCGCGT TTCACCCCGG CCTCGACCTC 
TCCCGGATCG ACCATGTGCA GAAAAAGGGA CTGAACCCGT TGGTGGACAG CTATTCGGCC 
TTCCGCGACA ACGATCAAAC GGCCCTGACT GGCCTTGGTA CCTGGCTGAT CGACAAGGGC 
GTCACCGAAC TGGATGTCAT GGGCCTTGCC ACCGATTACT GCGTCAAGTT TTCCGTGCTG 
GATGCGCTGG ACATGCTGCC GGGCGTTACC GTGCGCTTGA TTGTCGATGG CAGCCGGGGC 
ATTGATCCGC AAACGGTGGA GGCAGCGATT GCCGACATGC AGGCCCATGG CGCACGGTTG 
ATCACCAGCG CGGATGTCCT CGCCTAA 

 

Protein sequence

MTKALLLIDI QNGFCPGGNL PVAEGDQIVP IANALMASGS YDLIVASQDW HPANHGSFAS 
QHPGAKVFEL GELSGKPQMM WPDHCVQGTV DAAFHPGLDL SRIDHVQKKG LNPLVDSYSA 
FRDNDQTALT GLGTWLIDKG VTELDVMGLA TDYCVKFSVL DALDMLPGVT VRLIVDGSRG 
IDPQTVEAAI ADMQAHGARL ITSADVLA