| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2836 |
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| Symbol | pcrA |
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| ID | 7385958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2359507 |
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| End bp | 2362083 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651867 |
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| Product | DNA helicase II |
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| Protein accession | YP_002550052 |
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| Protein GI | 222149095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGCCTTTC GAGGTAGAAT CACTACATTG AAGGGCATGA GCAACGGTTT TGACGATATT
CCCTTCTTTG ACGAAGAGCC TGCACCCCGG ACCTCCGCAA AAGGAGCGAA AGCCACGGAT
GCGCCTGCGC CCCAACAGGA GAGCAGCCCT GCGGCAAGCA CCAAAGCTGG GGGCGGATTG
GGCATCGCGG CGCGTGCCAT GGCCGCGCGC GACCAGAACC GCAATCCAGA TTACCTCGCA
GGCCTCAACC CGGAACAGCG TGAAGCAGTC GAAACCCTGG ATGGTCCGGT TCTGGTGCTG
GCGGGTGCCG GCACCGGTAA GACGCGAGTG TTGACCACCC GTATCGCCCA TATTCTGGCC
ACCGGCCGCG CTTTCCCCAG CCAAATCCTC TCCGTCACCT TCACCAACAA GGCGGCCCGC
GAGATGAAAG AGCGCGTCGG CGTTCTGGTT GGCGGTGCAG TCGAAGGCAT GCCCTGGCTT
GGCACATTCC ACTCCATCGG CGTCAAGCTC TTGCGCCGCC ATGCCGAACT GGTCGGCCTG
ACCTCAGATT TCACTATTCT CGATACCGAT GACGTGGTGC GGCTGATCAA GCAGATCATC
CAGGCCGAAG GGTTGGACGA CAAACGCTGG CCCGCCAAGA TGTTTGCCGG AATGATCGAC
GGCTGGAAAA ACAAGGGCCT CGACCCCGCG CAGATCCCCG AGGGCGACGC CCGTGCCTTT
GGCAATGGCA AGGGCCGCGA GCTTTACGCC GCCTACCAGG CTCGGCTGAA AAGCCTGAAT
GCCTGCGATT TCGGCGATCT TCTCCTGCAC CCGATCCGGA TGTTCCGCGC CAATCCGGAT
GTGCTGAAGG ACTATCACCA GCGCTTTCGC TATATTCTGG TGGATGAATA TCAGGACACC
AACACGGCGC AATATATGTG GTTGCGGCTG TTGGCGCAGC GGCCAAGCAC AAAAACCGCT
GACGGCAAGG TCACAAACGG CACAGTGAAT ATTTGCTGCG TTGGCGACGA CGATCAGTCG
ATCTATGGCT GGCGTGGGGC CGAAGTGGAC AATATCCTGC GCTTCGAGAA GGATTTTCCG
GGCGCGAAAG TCATCAAACT GGAGCGGAAT TACCGCTCGA CGGAGCATAT TCTTGGCGCT
GCCGGTTTTC TGATTGCCCA TAACGAGGGT CGTCTGGGTA AGACGCTGTT TACCGACCGG
GTCGATCCGA ACGACGAAAA AGTCGTGGTG CATGCCGCCT GGGATTCCGA GGAGGAAGCC
CGCGCGGTTG GCGAGGAAAT AGAACAGCTG CAACGCAACC AGCATAAGCT CAACGACATG
GCCATTCTGG TGCGCGCCTC CTTCCAGATG CGCGAGTTTG AAGACCGGTT CGTGACGCTT
GGGCTGAACT ATCGGGTTAT CGGCGGCCCG CGCTTTTACG AGCGATTGGA AATCCGCGAT
GCCATGGCCT ATTTCCGCAT GGTCTGCCAG CCCGCTGACG ACCTGGCCTT CGAGCGGATC
GTCAATACGC CAAAGCGCGG TCTGGGCGAC ACTACGGTGC GCACCCTGCA TGACTATGCC
CGCAAACGAG ATATTCCGAT GCTGGCAGCG GCCTCCGACA TCATCGAGAC CGATGAGCTG
AAGCCGAAGG CGCGCAAGGC GCTGTTTGAC GTGGTGACGG ATTTCCGCCG CTGGCAGGAT
CTGCTGGAAA ACACGCCGCA TACCGAGCTT GCCGAACAGA TCCTCGACGA GAGCGGCTAT
ACCGCCATGT GGCAAAACGA CAAATCGGCG GAAGCACCAG GGCGGCTGGA AAACCTGAAG
GAACTGATCC GCTCGATGGA AGCCTTCGAG AGCATGCGCA GCTTCATGGA GCATGTCTCG
CTGGTGATGG ATGCCGAGAC CAACGAAAAT CTCGACGCCG TATCGATCAT GACGCTGCAT
TCCGCCAAGG GGCTGGAATT TGAGACCGTG TTCCTGCCCG GCTGGGAAGA AGGCCTATTT
CCGCATCAGC GCGCACTGGA CGAAGGCGGA CGCGCCGCGC TGGAGGAAGA ACGGCGGCTG
GCCTATGTCG GCCTGACGCG GGCCAAGCGC CGCTGCCACC TGTGGTTCGT TTCCAACCGG
CGCATCCATG GCCTGTGGCA ATCAACCATG CCGTCGCGCT TCCTGGATGA ACTACCGCCC
GCCCATGTGG AAGTGGCCGA AGTGGAAACC AGCTACGGCG GCTATGGACG CGGCGGCTAC
GGCCAGTCCC GCTTCGACAA GCAGGAACCG TTCACCAATT CCTACTCCAC CCCCGGCTGG
AAGCGCGCCC AGGCCAACAA AACCGACGCC ACCCGCGAAA ACTGGGGCAG CCGCTCCGGC
CACGCGGTGG AACGCATCGG CTACGGCGAA AGCGGCCCCC GCGGCCAAAC CATCGACGGC
CAGTTGGTCG CCAAATCCAC CAGCAATGAA CCGTCAAAGT TCTCCGTCGG CGACCGGGTT
TTTCATATCA AATTCGGCAA CGGCAATGTG TCTGTCGTTG AGGGAAACAA GCTGACGATC
GATTTTGATC GGGCGGGGCA AAAGCGGGTG CTGGATGGGT TTGTGGAGCG GGCTTAG
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| Protein sequence | MAFRGRITTL KGMSNGFDDI PFFDEEPAPR TSAKGAKATD APAPQQESSP AASTKAGGGL
GIAARAMAAR DQNRNPDYLA GLNPEQREAV ETLDGPVLVL AGAGTGKTRV LTTRIAHILA
TGRAFPSQIL SVTFTNKAAR EMKERVGVLV GGAVEGMPWL GTFHSIGVKL LRRHAELVGL
TSDFTILDTD DVVRLIKQII QAEGLDDKRW PAKMFAGMID GWKNKGLDPA QIPEGDARAF
GNGKGRELYA AYQARLKSLN ACDFGDLLLH PIRMFRANPD VLKDYHQRFR YILVDEYQDT
NTAQYMWLRL LAQRPSTKTA DGKVTNGTVN ICCVGDDDQS IYGWRGAEVD NILRFEKDFP
GAKVIKLERN YRSTEHILGA AGFLIAHNEG RLGKTLFTDR VDPNDEKVVV HAAWDSEEEA
RAVGEEIEQL QRNQHKLNDM AILVRASFQM REFEDRFVTL GLNYRVIGGP RFYERLEIRD
AMAYFRMVCQ PADDLAFERI VNTPKRGLGD TTVRTLHDYA RKRDIPMLAA ASDIIETDEL
KPKARKALFD VVTDFRRWQD LLENTPHTEL AEQILDESGY TAMWQNDKSA EAPGRLENLK
ELIRSMEAFE SMRSFMEHVS LVMDAETNEN LDAVSIMTLH SAKGLEFETV FLPGWEEGLF
PHQRALDEGG RAALEEERRL AYVGLTRAKR RCHLWFVSNR RIHGLWQSTM PSRFLDELPP
AHVEVAEVET SYGGYGRGGY GQSRFDKQEP FTNSYSTPGW KRAQANKTDA TRENWGSRSG
HAVERIGYGE SGPRGQTIDG QLVAKSTSNE PSKFSVGDRV FHIKFGNGNV SVVEGNKLTI
DFDRAGQKRV LDGFVERA
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