Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2832 |
Symbol | pstC |
ID | 7385956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2357108 |
End bp | 2358082 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651865 |
Product | phosphate ABC transporter permease protein |
Protein accession | YP_002550050 |
Protein GI | 222149093 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0573] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR02138] phosphate ABC transporter, permease protein PstC |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.111498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTCA TCCATCAACC GACCATGAGC GAGGAAGAGG CAAGAACCGC TGCCGCCAAG CGGGTGCGCT TTGCCGATGC ATTGTTCATC CGCGCCACCT GGCTTTGCGC CATGCTGGTT ATGGTCGCAT TGCTCGGGGT GTTTCTGTCA CTGCTGATCG AATCCCTGCC GACCTGGCGG GAATTCGGCA TATCCTTTCT GTGGAACGAA CGTTGGAGCC CGGCCAAGGA CATTTACGGG GCAGCCGCTC CGATTTACGG CACGTTGATT ACCTCGGTCA TCGGGCTTGT TATTGGCGTT CCCGTCAGTT TCGGCATCGC CATCTTTCTC ACCGAAATGT GCCCGCCGCT GCTGCAACGG CCCATCGGCA CGGCCATCGA GCTTCTGGCG GGTATTCCCA GCATTATTTA CGGGCTCTGG GGCTTCTTCG TGCTGGCGCC GGTCATGCAA TCCGTGGTGC AGCCCGCTTT GATCGCCACA TTCGGAAATG TGCCTGTTCT CGGCCTGCTG TTTAGCGGCG CACCCTATGG CATCGGTCTT CTGACGGCGG GGATCGTGCT GGCGATCATG GTCATTCCAT TCATCACCTC CGTCACCCGC GACGTGTTCG GCACCGTGCC GGTGCTACTC AGGGAATCCG CCTACGGCAT GGGCATGACC ACCTGGGAAG TCGTCTTCCA CATCATCATT CCCTATACCC GGCGCGGCCT GATCGGCGGC GTCATGCTGG GCCTTGGCCG GGCGCTGGGC GAAACCATGG CAGTCACCTT CGTGATCGGC AATTCGCACC GGATTGCCAC CTCGCTGCTC TCGCCCGCCA CGACGATTTC GGCTTCGATT GCCAATGAGT TTTCCGAGGC GACGTCGGAT CTCTATACGT CCAGTCTGGT GGCGCTTGGT CTCATCCTGT TCTTCATCAC CTTTGCAGTG CTGGCGCTTG CCAAGTGGCT CATCGGGCGC AGTGAAAGTT TTTGA
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Protein sequence | MTVIHQPTMS EEEARTAAAK RVRFADALFI RATWLCAMLV MVALLGVFLS LLIESLPTWR EFGISFLWNE RWSPAKDIYG AAAPIYGTLI TSVIGLVIGV PVSFGIAIFL TEMCPPLLQR PIGTAIELLA GIPSIIYGLW GFFVLAPVMQ SVVQPALIAT FGNVPVLGLL FSGAPYGIGL LTAGIVLAIM VIPFITSVTR DVFGTVPVLL RESAYGMGMT TWEVVFHIII PYTRRGLIGG VMLGLGRALG ETMAVTFVIG NSHRIATSLL SPATTISASI ANEFSEATSD LYTSSLVALG LILFFITFAV LALAKWLIGR SESF
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