| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2829 |
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| Symbol | |
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| ID | 7385953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2353880 |
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| End bp | 2355289 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651862 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002550047 |
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| Protein GI | 222149090 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGA AGGATGTTGT GGCGGGAATT CGCAACGAGG AAGGGATCTC AACCGTTCTG
GATCTGCTCA AGCAGTCCTT CGGCGAGCGG TTCCAGACCG GCCAGTCCTT CCGGGAACAA
CATGCGCACA CCACCACCTA TCTGCCGGCG CAATTGCCCG ATGGGGTGGT TTTCGTCGAA
AGCGCCGAGG ACGTGAAGAC CGTTGTGCGG ACCTGCGCCC AGCATAAGGT GCCGATGGTG
CCGTTCGGAG TTGGCTCTTC GCTCGAGGGG CAGGTCAATG CGGCGCATGG CGGTATTTCC
ATCGATTTCA CCCGGATGGA CAAGGTTCTC GAGGTCAATG CCGAGGATCT CGACTGCACC
GTTCAGCCCG GCGTGACGCG CGAGGCGCTG AACACCTATC TGCGCGATAC CGGTCTATTC
TTCCCCATCG ATCCCGGTGC CAATGCTTCC ATCGGCGGCA TGGCCTCGAC CCGTGCTTCC
GGCACCAATG CGGTGCGCTA TGGTACGATG AAGGACAATG TCATGGCGCT GACGGTGGTG
ACCGCCAATG GCGAAGAAAT CCGCACCGCC CACCGCGCCC GCAAATCCTC GGCGGGCTAT
GATCTGACCC GGCTGTTTGT CGGTGCTGAA GGCACGCTGG GCGTGATCAC CTCGATCACC
CTCAAACTTC AGGGCATCCC GGAAAAGATC GGTGGCGGTG TCTGCGCCTT TGCCGATGTC
AAATCGGCCT GCGATGCTGT CATCATGACC ATCCAGATGG GCATTCCCGT GGCGCGGATC
GAGCTGCTCG ACGCCATGCA GGTCCGAGCC TGCAATGCCT ATTCCAACCT CAGCCTGCCA
GAAAGGCCGA CGCTGTTTCT GGAGTTTCAC GGCACGGAGC AGACGGTGGC CTTGCAGGCG
CAGCAATTTG CCGCCATTGC CGAGGAATAT GGCGCCGAAG ACCTGCGCTT CACCTCCGAT
CCGCAGGAGC GCGCCCAACT GTGGAAGGCA CGTCACAACG CCTATTGGGC AGGCCGGGCG
CTTGCCCCGG AACTGGCGGG CTTGTCCACC GATGTCTGCG TGCCGATCTC CAAACTGGCG
GAATGCGTGG CAGAAACCCA GGCCGATATT GCTGAGACCG GGCTATTGGC GCCGATTGTC
GGCCATGTCG GCGATGGCAA TTTCCATCTG CTGATCCTGT TTGACGACAA GGACGCCGAA
AATGTCGATA AGGTGGAGGC GTTCATGGCG CGGCTGAACG AGCGGGCGCT GGCCATGGAC
GGCACCTGCA CTGGCGAACA TGGGGTCGGC CAGGGCAAGA TGTCCTATCT GGAAGCAGAG
CTTGGCGGTG CATTAGATGT GATGCGTCAG GTAAAGCGTG GACTGGACCC CGACAATCTG
TTTAATCCGG GCAAGATCTT CCGGCTTTGA
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| Protein sequence | MSRKDVVAGI RNEEGISTVL DLLKQSFGER FQTGQSFREQ HAHTTTYLPA QLPDGVVFVE
SAEDVKTVVR TCAQHKVPMV PFGVGSSLEG QVNAAHGGIS IDFTRMDKVL EVNAEDLDCT
VQPGVTREAL NTYLRDTGLF FPIDPGANAS IGGMASTRAS GTNAVRYGTM KDNVMALTVV
TANGEEIRTA HRARKSSAGY DLTRLFVGAE GTLGVITSIT LKLQGIPEKI GGGVCAFADV
KSACDAVIMT IQMGIPVARI ELLDAMQVRA CNAYSNLSLP ERPTLFLEFH GTEQTVALQA
QQFAAIAEEY GAEDLRFTSD PQERAQLWKA RHNAYWAGRA LAPELAGLST DVCVPISKLA
ECVAETQADI AETGLLAPIV GHVGDGNFHL LILFDDKDAE NVDKVEAFMA RLNERALAMD
GTCTGEHGVG QGKMSYLEAE LGGALDVMRQ VKRGLDPDNL FNPGKIFRL
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