Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2819 |
Symbol | folA |
ID | 7385945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2345416 |
End bp | 2345937 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651854 |
Product | dihydrofolate reductase |
Protein accession | YP_002550039 |
Protein GI | 222149082 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.198345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAA TCTCCATTGT CGTTGCCGTC TCAAACAACG GCGTGATCGG TCGCAATGGC GACATGCCCT GGAAGCTGAG CACCGATCTC AAGCGGTTCA AGGCGCTGAC GCTTGGCAAG CCACTGGTAA TGGGCCGCAA GACTTTTGAG AGTTTCGGGT CCCGGCCGCT TCCCGGCCGC CCGCATGTGA TTGTCAGCCG CCACGCCGAT ATCGCCATGC CCTCGGTAGA AACCGTGCGT AGCCTTGAGG CGGGGCTTGA GCGGGCAGGG CAGATTGCCG AAGATTTGGG GGGCGAGGAG ATCTGCGTGA TCGGCGGCGG TGAAATCTAC CGGCAGGCAT TGCCGCTGGC TGATGTCCTG CATGTCACCC ATGTGGAAAC GCAGATTGCC GATGGCGATA CAGTTTTTCC GGCAATCGAT CCGTCACAGT TTGAAAAACT GCATGAAGAG GCTGTGCCGG CGGGCGAACG CGACAGTTTC GCCACGCGCT ACGCGATCTA TCGGCGAAAA GCGGCTTTAT AA
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Protein sequence | MPKISIVVAV SNNGVIGRNG DMPWKLSTDL KRFKALTLGK PLVMGRKTFE SFGSRPLPGR PHVIVSRHAD IAMPSVETVR SLEAGLERAG QIAEDLGGEE ICVIGGGEIY RQALPLADVL HVTHVETQIA DGDTVFPAID PSQFEKLHEE AVPAGERDSF ATRYAIYRRK AAL
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