| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2797 |
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| Symbol | rhtB |
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| ID | 7385932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2330379 |
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| End bp | 2330972 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651841 |
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| Product | RhtB family transporter |
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| Protein accession | YP_002550026 |
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| Protein GI | 222149069 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.376861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACCCG AAACGCTTGT CGCCTTGATT CTCTTTGCCT TCACTACGTC GATTACGCCA
GGTCCAAACA ACATGATGCT GTTTGCGTCA GGAGTAAATT TTGGCTTTCT GCGCACTCTG
CCGCATATGC TTGGCATTGG TGCGGGCTTT TTCACGCTAT TGATTGGTGT TGGACTGGGA
TTGGGTGCCT TGCTTGCGGC AGTGCCCATG CTTTATCACG GGCTGAAAAT TGCCGGTGGT
CTCTATCTAC TGTGGATTGC CTGGAAGATC GGTTCCTCAC GCAGCCTTGG TGAAGGCAAG
GCGCAGGCGG TGCCGATGTC CTTTCTGGCC GCAGCGGGAT TTCAATGGAT CAATCCCAAG
GCGTGGGTCA TGGCTGTCAC GGCCATGGCG ACCTATACCA ATCCGCAAGT CTATTGGTTC
ACGGTGTTTC TGGTCGGGCT GGTGTTTGCG CTGGTGAATG TGCCTGTCGT CTCGGCCTGG
GCTGGATTCG GCTCAGTGCT GCGGGAATGG CTGTCCAATC CGGTGCGGTT GAAGTGGTTC
AATATCACCA TGGCCTTGCT GCTGGTCGTA AGCCTGTGGC CTATGCTGGC ATAA
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| Protein sequence | MTPETLVALI LFAFTTSITP GPNNMMLFAS GVNFGFLRTL PHMLGIGAGF FTLLIGVGLG
LGALLAAVPM LYHGLKIAGG LYLLWIAWKI GSSRSLGEGK AQAVPMSFLA AAGFQWINPK
AWVMAVTAMA TYTNPQVYWF TVFLVGLVFA LVNVPVVSAW AGFGSVLREW LSNPVRLKWF
NITMALLLVV SLWPMLA
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