Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2787 |
Symbol | |
ID | 7385923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2320419 |
End bp | 2321132 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651832 |
Product | aspartate racemase |
Protein accession | YP_002550017 |
Protein GI | 222149060 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.328239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATGA TCGGCTTGAT TGGCGGAATG AGCTTTGAAA GCTCGGCGGT TTACTATCGG CTCATCAATG AGGCAGTTCG CCATCAGTTG GGCGGTTTGG CATCGGCTGA AATCGTCATG CGCTCGGTCG ATTTTTCGCA GATTGTTGGC TACCAAAAGG CAGGCCGTTG GGATCTGGCG GAAAAGGTGC TGGGCGATGC CGCTGCCGCC CTGGAACGCG CCGGTGCCGA ATGCGTGTTG ATCTGCACCA ACACCATGCA TCTGATTGCC GATGCCGTGG CGGCCCGTGT TTCCGTGCCG CTTATCCATA TTGTCGATGC AACGGCCCAG GCCATCAAAG ACGCTGGCTT CAAACGGCCC CTGCTGCTGG CCACCCGCTA CACGATGGAG CATGGCTTTT ATACCGATCG CATGCGCGCC CTCGGCCTGC TGCCCATGGT GCCAGGCGCA GAGGATCGCG GCATCGTCCA TGATGTGATT TTCGATGAAC TCTGCGCTGG CCGGGTCGAA GCACAGTCGC GGGCTGCCTA TCTGGCGATC ATTGAAAAGG CCAAGGCAGA CGGTGCCGAT TGCGTCATTC TCGGCTGCAC CGAGATTTGC CTTCTGCTCG ATCCCAAAAA TCTTTGCCTG CCGGGCTTTG ATTCCACTGC CATTCACTGT GCGTCTGCGG TGGAATTTTC GCTCACTCCG CAACAGGTTA AGAAGATCGC CTGA
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Protein sequence | MRMIGLIGGM SFESSAVYYR LINEAVRHQL GGLASAEIVM RSVDFSQIVG YQKAGRWDLA EKVLGDAAAA LERAGAECVL ICTNTMHLIA DAVAARVSVP LIHIVDATAQ AIKDAGFKRP LLLATRYTME HGFYTDRMRA LGLLPMVPGA EDRGIVHDVI FDELCAGRVE AQSRAAYLAI IEKAKADGAD CVILGCTEIC LLLDPKNLCL PGFDSTAIHC ASAVEFSLTP QQVKKIA
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