Gene Avi_2782 details

Gene Information

• Locus tag: Avi_2782
• ID: 7385920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2317417
• End bp: 2317926
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651829
• Product: methionine sulfoxide reductase A
• Protein accession: YP_002550014
• Protein GI: 222149057
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0225] Peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00401] methionine-S-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.902177
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAGTG AACGCGCAGT GTTGGCAGGC GGTTGCTTCT GGGGCATGCA GGACCTGATC 
CGCAAGCTTC CCGGGGTCAT CGCTACCCGA GTGGGATATT CCGGCGGCGA TGTCGCGAAC 
GCGACCTATC GCAATCATGG TACGCATGCC GAGGCGATTG AAATTATCTT CGATCCATCA 
AAGACAAGCT TTCGCGATCT CCTGGAGTTT TTCTTCCAGA TTCATGATCC AAGCACGCCT 
AATCGGCAGG GAAACGATGT CGGCGTCAGC TATCGGTCTG CGATCTTCTA CACGAGTGAA 
GAGCAAAAGA AGGTTGCCGA GGACACCATT GCTGACGTGG ACGCTTCCGG CATCTGGCCT 
GGCAAGGTCG TGACCGAACT GGCGCCTGTG GGTGATTTCT GGCAGGCCGA GCCGGAGCAT 
CAGGACTATC TTGAGCGCAT TCCAAACGGC TATACCTGCC ATTTTCCGCG ACCGCATTGG 
AAACTGCCGA AACGTCAGGC TGTGGCATAA 

 

Protein sequence

MTSERAVLAG GCFWGMQDLI RKLPGVIATR VGYSGGDVAN ATYRNHGTHA EAIEIIFDPS 
KTSFRDLLEF FFQIHDPSTP NRQGNDVGVS YRSAIFYTSE EQKKVAEDTI ADVDASGIWP 
GKVVTELAPV GDFWQAEPEH QDYLERIPNG YTCHFPRPHW KLPKRQAVA