Gene Avi_2767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2767 
Symbol 
ID7388417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2307238 
End bp2307813 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content60% 
IMG OID643651819 
Producttranscriptional regulator 
Protein accessionYP_002550005 
Protein GI222149048 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.449459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATGG ATATCGCGAC CTACATAGCC CAACTGCTCA GCATGAAAAA ATGGAACCAG 
GTCAAGCTGG CGGCCCATTT TGGCGTGTCC CAATCCACCG TCAATCGATG GAAGTCCGGC 
TCCGAGCCGG AAGGCCACCA TCGCGATGCC ATTCGCGAGC TCTACAACAT GGAATTCGGC 
ACGCCCGACA GCAAACCGTT CAAGCGCGTC AAGCTGATGG GCAAGGTCGG CGCCGGCCAG 
GAAATCTACG CCATCGACGA TGGCGGCCAA AACTATGTCG ATGCGCCGGC AGATGCCCAT 
CAGAACACCG TTGCCGTCGA GGTGTCCGGG GAATCGATGT ATCCCGCCTA TGAAGAGGGA 
ACCATCCTCT TCTACTCCAA GACCCTGCCA CCCTCCGAGA TGGTCAACAG GCGCGCCGTC 
GTGCAGCTGG CCGACGGGCG GATCTTCGTC AAAACCGTTC GCCCGGGGAC GACCCCGAAC 
ACCTGGACAC TGACCAGCAT CAATGCGCTC TACCCAGACA TGATCGACCA GATCGTCGAG 
TGGGCCGCCC CGATCGACTG GATCAAGCCG CGGTAA
 
Protein sequence
MPMDIATYIA QLLSMKKWNQ VKLAAHFGVS QSTVNRWKSG SEPEGHHRDA IRELYNMEFG 
TPDSKPFKRV KLMGKVGAGQ EIYAIDDGGQ NYVDAPADAH QNTVAVEVSG ESMYPAYEEG 
TILFYSKTLP PSEMVNRRAV VQLADGRIFV KTVRPGTTPN TWTLTSINAL YPDMIDQIVE 
WAAPIDWIKP R