| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2753 |
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| Symbol | tnp |
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| ID | 7388405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2293634 |
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| End bp | 2294494 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651808 |
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| Product | transposase |
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| Protein accession | YP_002549994 |
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| Protein GI | 222149037 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.403453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCG CGTTCATTGC AAAGCACCGT TCGATCTGGC CGGTGGCATG GCTATGCGAA
GCGCTGGGTG TCTCTCGTTC CGGCTTCCAT GCCTGGCTCA ATCGTTCTCC GAGCCACCAT
GCCCGGTATG ACGAGGTTCT CCTGGACAAG ATCAAAGGCA GCTTCAAAGA TAGTGACCGC
ACCTATGGTG CCCGGCGTGT CTGGCACGAT CTTCTTGCTG AAGGCTTTTC CTGTGGCCTG
CATCATGTCG AACGGCTCAT GCGCACGAAC GCGCTGAGAG CAAGGCCGAG AAGACGTGGC
TTGCCGAAGG ATGCCGGCGA ACGCTCGGTC ATCATGCCGA ATGTTCTGGA CCGCCAGTTT
GCGGCGGACA GGCCGAACCA GAAATGGGTC GCTGATTTTA CCTATCTATG GACCGCAGAG
GGCTGGCTTT ATGTCGCCGC CGTCATCGAC CTGTTCTCAC GTCGTGTTGT CGGCTGGTCG
ATGAACTCCA GCATGACCTC CCAGCTCGTG ACCGATGCTC TGATCATGGC GATCTGGCGC
AGAGGAAAAC TGGACGCGTT GCTGCATCAC TCGGATCAGG GCAGCCAATA TACCAGCGAA
CAGTTCCAGC GCCTCATGGC CGACCACGGC ATCACCTGTT CGATGAGCCG GTCGGGCAAT
GTCTGGGACA ATGCCGCCAT GGAAAGCTTC TTCTCATCAC TCAAAACGGA AAGGACGGCC
CGCAAGGTCT ACAGAACCAG GTACGACGCC AAGGCAGATG TGTTCGACTA CATCGAGCGC
TTCTATAATC CTAAGCGTCG GCATTCGACA CTGGGTTATC TCAGCCCGAT GGAATTTGAA
AACAAGGTGG GATTAGCTTA A
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| Protein sequence | MKFAFIAKHR SIWPVAWLCE ALGVSRSGFH AWLNRSPSHH ARYDEVLLDK IKGSFKDSDR
TYGARRVWHD LLAEGFSCGL HHVERLMRTN ALRARPRRRG LPKDAGERSV IMPNVLDRQF
AADRPNQKWV ADFTYLWTAE GWLYVAAVID LFSRRVVGWS MNSSMTSQLV TDALIMAIWR
RGKLDALLHH SDQGSQYTSE QFQRLMADHG ITCSMSRSGN VWDNAAMESF FSSLKTERTA
RKVYRTRYDA KADVFDYIER FYNPKRRHST LGYLSPMEFE NKVGLA
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