Gene Avi_2739 details

Gene Information

• Locus tag: Avi_2739
• ID: 7388393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2273622
• End bp: 2275577
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651796
• Product: hypothetical protein
• Protein accession: YP_002549982
• Protein GI: 222149025
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3511] Phospholipase C

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0522318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACAC AGCAATATGC GAACATCAGT ATCACGAATA ATACCGGGCA AGACGCCGAT 
ATCGTGCTAT TCCATCAGAA CAGTAGCAAC GGGATCCAAC GTGGGAGCTG GGCGGTCGGC 
GTTGGAGCAA CGGCCGGCCC GCTCAAGGTC CTTTTCGAAA CCGGCCTCGG TACCCAAGGA 
ATATTGGATT ACTGGTCAGT TATGTTATTC GTACGGTCAG GTCCCCAAGC CGGACTCTAT 
GTCAGCAGCG GCTCCGTGAC CGATCCATAC TGGAAGGAAT GCCAACTCCA GCATGCCGAC 
GCGAGCCAGT CGATCACCCT TTCAGTCGAC ACATCGACGT TCAACGTGGC GCTCAAGTCC 
AGCGGCTGCA CAAACGGCAT GACGCGCCTC ACTCCCGCTG TGGCCAAGCC CATCAGCCAT 
GTGTTCGTAG TAATGCTGGA AAACCATTCC TTCGATAATA TGCTCGCGAT GTCGGGCATT 
CCGGGTATTA CCGCCGCAAC CGCGGCTAAT TACAATGAAT ATAACGGGAC GACTTATCAC 
GTTCAGTCGG GCGCACCGCT GAGCATGCCG ACCGATCCGG GGCATGAATT CGATGATGTC 
GTCACGCAAC TGGCGGGTCC CGGTGCGACC TTCGAGAGCG GCCAGGCCTA TCCTGCGATC 
GATAATTCCG GTTTCGCCGC AAGCTATGCC ACGTCAACTA CCGAAGATCC CCATATACCT 
CCGGCAGCGA ACCAGATTCA ATATATCATG AACGCTTTCG ACACGCCGAC GCAGCTCCCA 
GTTTTGGGGT GGCTGGCGTC ACAGTTTGGC GTTTGCGATC ACTGGTATTC GTCGCTACCC 
GGACCCACGT GGCCGAACCG TTTCTTTCTC CACGGCGCTT CGTCCTCCGG CTTCGACGAT 
AGCCCCGGTT CCGCTCAAAT GGCGGGTTGG GAACTCCCTG GTCTCGGGTT TAAGTACCCC 
AACGGATCCA TCTACCAACG CTTGGCATCG CAAGGAATCC CCTATCGTTT CTACAGAGAC 
GCCAATTCGT CACATCTTAG CCTCTACAGC GACGATCCCG CAGCCGGCTC CATTCTAGGC 
TCAGTCCCGC AAGTATCATC GCTATCCGGC GTGACGTTGG GGGATTTTAA CTCCTTGCAG 
AATTTTGCAG CTGATCTGCA GGGGCCTTAT CCTTATCCCT ATACGTTCAT CGAACCCCAC 
TATGGAGATA TCACAGGCGG GACCTATCAA GGCGGCTCCT CGCAACATCC GATGGATGAT 
CCATACGGCG GCGAGCATCT ACTCGCCGCC GTATATTCGG CAATCCGAAA CTCGCCCTAT 
TGGGACACCA GCTTGTTGGT CGTCATCTAC GACGAACATG GCGGATACTA CGACTCCGTC 
AGCCCTGAGA ATGGAACAGC GACTGCGCCC GGTGATAATC CAAACTACGG CTACAACACC 
CATGGATTCG ATTTTACGAC ACTGGGAGTA CGTGTGCCCG CGGTACTAGT CTCACCGCTC 
ATCCCGCAGG GCACGGTCGA CCATAACACC TACGATCATT CTTCCGTGCC TAAGCTATTG 
GAAGATCTTT GGGGCCTTGC GCCGCTTACA AATCGTGATG CAGCAGCAAA CTCCCCGCTC 
GGAAACATCA GTTTGACTTC TGCGCGAACT TTGCAGGCGC CTCCAGCCCC GATCCCCTCA 
GCCAATTCCA TCGGGCAGGT GCGGACCGTC GCAGAAAGAG CGATTACATT GGGGCAAAAC 
CTTCCCGAAC GTGGCAACCT CGCGGGTACA GTTGCCACTT TGCGAAAAGC CGACGCCGAA 
CTTTCCGACC AGTCACCCAC TGCTATAGCA GCTATTCAGG CGAAGGCAGC CACCATCCGG 
ACACGTGGTG ACGCGGAAGC TTATGCGGCC GAGGTTCTGG CAAAACTTGA CGCCGCCCAA 
GCGCAGCGAC GCATAATCAG GCGCGGGCGG CATTAG 

 

Protein sequence

MTTQQYANIS ITNNTGQDAD IVLFHQNSSN GIQRGSWAVG VGATAGPLKV LFETGLGTQG 
ILDYWSVMLF VRSGPQAGLY VSSGSVTDPY WKECQLQHAD ASQSITLSVD TSTFNVALKS 
SGCTNGMTRL TPAVAKPISH VFVVMLENHS FDNMLAMSGI PGITAATAAN YNEYNGTTYH 
VQSGAPLSMP TDPGHEFDDV VTQLAGPGAT FESGQAYPAI DNSGFAASYA TSTTEDPHIP 
PAANQIQYIM NAFDTPTQLP VLGWLASQFG VCDHWYSSLP GPTWPNRFFL HGASSSGFDD 
SPGSAQMAGW ELPGLGFKYP NGSIYQRLAS QGIPYRFYRD ANSSHLSLYS DDPAAGSILG 
SVPQVSSLSG VTLGDFNSLQ NFAADLQGPY PYPYTFIEPH YGDITGGTYQ GGSSQHPMDD 
PYGGEHLLAA VYSAIRNSPY WDTSLLVVIY DEHGGYYDSV SPENGTATAP GDNPNYGYNT 
HGFDFTTLGV RVPAVLVSPL IPQGTVDHNT YDHSSVPKLL EDLWGLAPLT NRDAAANSPL 
GNISLTSART LQAPPAPIPS ANSIGQVRTV AERAITLGQN LPERGNLAGT VATLRKADAE 
LSDQSPTAIA AIQAKAATIR TRGDAEAYAA EVLAKLDAAQ AQRRIIRRGR H