| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2726 |
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| Symbol | rrpX |
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| ID | 7388381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2257092 |
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| End bp | 2257925 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643651784 |
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| Product | two component response regulator |
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| Protein accession | YP_002549970 |
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| Protein GI | 222149013 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.54081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTATC TTGGCGTTTC AGGAATGCAA TATTCCGGCG AAAAATTTCC GGACGCACGT
ATTATCGTCG CAGAAGACTC CAATGTCTTT ACATCCATGA TCACGCAACG TTTGAAAGAG
ATTTTCAATA TTGATGCGGA AATCTGCCGT ACCTATGAAG ATTTGATGGC CGCAAACGAG
CTTTCCGACG AGCCTGTTAC ATTGGCAATC TCCAATATCA ACCTGCCGGG CGCCGAAAAT
GGCGAGGCTT TGGAATATCT GACCGATCTG AACATTCCAA CTGTTGTCTT TACCAGCACG
TTCCACGAGA AAACCCGTGA AAAGCTTTTG GCCAAGGATA TTGTCGACTA TATCCTCAAG
GACAATATTT TCGCGGTTGA AATGCTGATT GAGTCCGTCT GCCGCTTTCT CACCAATCAC
AATCACCACG TGCTGATCGT TGATGACAGC CCGACGGCGC GCGCTTTGCT GTCGAGCCGC
TTGAAGCGCT ACAATTTCCG GGTCAGCACG GCGGATAACG GTGCCACGGC CCTGCAACTG
CTGAAGAGCA ATGCCGATAT CGGTCTGGTC GTGACCGACT ATAACATGCC TGATATCGAT
GGATTTGAAC TGACGCGGCG TATCCGGGCT GTGCGCGGTT CGCATGAACT GCGGATCATC
GGCGTGTCGT CCTCGTCTGA CCGTTTGCTG TCTGCGCGTT TCCTAAAGGT TGGCGGCAAT
GATTTCATGC TGCGCCCGTT CATCGACGAA GAATTCTACT GCCGGGTCAA TCAGAACCTC
GATACGCTGG TGCAGATCCG CGCCGGGCGC AAGAGAAACC AAGCCGCAGC CTGA
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| Protein sequence | MTYLGVSGMQ YSGEKFPDAR IIVAEDSNVF TSMITQRLKE IFNIDAEICR TYEDLMAANE
LSDEPVTLAI SNINLPGAEN GEALEYLTDL NIPTVVFTST FHEKTREKLL AKDIVDYILK
DNIFAVEMLI ESVCRFLTNH NHHVLIVDDS PTARALLSSR LKRYNFRVST ADNGATALQL
LKSNADIGLV VTDYNMPDID GFELTRRIRA VRGSHELRII GVSSSSDRLL SARFLKVGGN
DFMLRPFIDE EFYCRVNQNL DTLVQIRAGR KRNQAAA
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