Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2723 |
Symbol | |
ID | 7388379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2255616 |
End bp | 2256542 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643651782 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002549968 |
Protein GI | 222149011 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCTA TCGTATCGAT CAAGTCCCTC ACCAAGACCT ATTCCACCGG TTTTTCGGCA TTGAAGGATG TGTCGCTGGA GATCGAGGAG GGCGAGATCC TCGCTCTGCT CGGCCCCAAT GGCGCGGGTA AGACCACGCT GATTTCCATC ATATGCGGCA TCGTCAATCC CACTTCCGGA ACGGTTGTTG TCGATGGTTA CGATGTCGTT CAGGATTTTC GCCAGACCCG GGCGCTGATT GGCCTCGTGC CGCAGGAACT GACCACGGAT CAGTTTGAGA CCGTGTGGAA TACCGTGGCG TTTTCGCGCG GGTTGCATGG GCGCAAGGCC GATCCAGCCT ATCTTGAGGG AATATTGAAA TCCCTGTCGC TCTGGGGAAA GCGCGATGCG GTGCTTCGGG AGCTTTCCGG CGGCATGAAG CGCCGGGTGC TGATCGCCAA GGCGCTGTCC CATGAGCCGC GCGTGCTGTT TCTGGATGAA CCAACGGCAG GGGTCGATGT CGCGCTCCGC CGCGATATGT GGAACCTGGT GCGTGATCTG CGCAGCCGGG GCGTCACCAT CATTCTCACC ACCCATTATA TCGAGGAGGC CGAGGAGATT GCAGACCGGA TCGGCATCAT CAACCAGGGC GAGGTGCTGC TGGTGGAGGA CAAGGTGGCG CTGATGCGCA AGCTTGGCCG CAAGCAGATG ATCCTGGACC TGGCCGAGCC GCTGAAAAGC CTGCCGGGGC GGCTGGACGA ATGGCGCCTC AGCCTCGCGG GCGAAGGTCG CCAGATCGTT TACGATTATG AGCCGCAGGC AACGCCCGGC GCCTTGATGG CGCTTTTGAC GGCGTTGGAA ACCTCCAGCA TCGCTGTGGT CGACATCTCC ACCAGGCAAA CCTCGCTCGA GGATATTTTC GTTTCGCTGA CCGGGGGGAA ATCATGA
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Protein sequence | MASIVSIKSL TKTYSTGFSA LKDVSLEIEE GEILALLGPN GAGKTTLISI ICGIVNPTSG TVVVDGYDVV QDFRQTRALI GLVPQELTTD QFETVWNTVA FSRGLHGRKA DPAYLEGILK SLSLWGKRDA VLRELSGGMK RRVLIAKALS HEPRVLFLDE PTAGVDVALR RDMWNLVRDL RSRGVTIILT THYIEEAEEI ADRIGIINQG EVLLVEDKVA LMRKLGRKQM ILDLAEPLKS LPGRLDEWRL SLAGEGRQIV YDYEPQATPG ALMALLTALE TSSIAVVDIS TRQTSLEDIF VSLTGGKS
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