| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2714 |
|---|
| Symbol | |
|---|
| ID | 7387970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2251648 |
|---|
| End bp | 2252676 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643651775 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549962 |
|---|
| Protein GI | 222149005 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCA GCACAATAGG CCTCGATCTG GCCAAGCATA ACTTTCACGT CCACGCAGTC
GATGCCGCGG GTTCGGTGGT TAGAACCGCC GCGCTTCGGA GAGGCGAGAT GATCAAGTTC
TTCCAGAATG CAAAGCCATG CCTCGTTGGT ATGGAAGCTT GCGCCACCGC GCACTATTGG
GCTCGCGAGC TGATGAAGCT CGGCCACGAG GTTAAATTGA TCCCGCCTTC GTACGTTAAG
CCATTTGTGC GGCGCGGCGC AAAGAATGAT GCCGCAGACG CTGCAGCCAT TTGCGAGGCC
GTCCGACGGC CTCATATGCG CTTCGTCTCT ATCAAGTCTG AATCCAATCA GGGCTTCCTG
ATGTTGCATC GAGCTCGAGG TCTGCTTGTA AGACAAAGGA CCATGACAGT TTGCGCGATC
CGCGCTCACC TTGCTGAGTT TGGAATCATC TTCGGTCAAG GTCGACAACG CATCGAGACC
ATAATGCCGT CGATAGAGGA CGTCGCAGCC TCGTTGCCAG AACAAGCTCG GTTCGCATTG
AACAGCCTGA TCCGCATGGT CGGTGAGTTG AACACACAGA TAGAGGGAAT TGAGATGAAG
CTGGCGGAAG TCGGTCGCTC AGATCCAGTC TCAAGCCTTC TGTCGTCGAT CCCAGGTGTT
GGTCCAATTA CATCTACAGC CATCGCTGCA ACCGTTCCGG ACGCGAGAAT GTTCCGCTCT
GGCCGAGAGT TTGCCGCTTG GCTGGGCCTA ACACCACGTC AAAACTCAAG CGGGGGCACA
ACTCGACTAG GTGCCATCAC CAAACAGGGA GATGCGTACC TACGTCATCT GCTTGTGATC
GGTGCCAGGA ACATCGTTCG ATATCCAAAG GCTCGAGCGA AAGTCGGGGG AGCTTGGATC
GACGCTTTGC TGCACCGACG GCGTCCCATG ATCGTGGCCG TCGCCGTGGC CAACAAGCTC
GCTCGGATCA TCTGGGCGAT GATGACAAGT GGAGAGATGT TCAGAGAGGC ACACGCAAAG
ATAGTGTAA
|
|---|
| Protein sequence | MTISTIGLDL AKHNFHVHAV DAAGSVVRTA ALRRGEMIKF FQNAKPCLVG MEACATAHYW
ARELMKLGHE VKLIPPSYVK PFVRRGAKND AADAAAICEA VRRPHMRFVS IKSESNQGFL
MLHRARGLLV RQRTMTVCAI RAHLAEFGII FGQGRQRIET IMPSIEDVAA SLPEQARFAL
NSLIRMVGEL NTQIEGIEMK LAEVGRSDPV SSLLSSIPGV GPITSTAIAA TVPDARMFRS
GREFAAWLGL TPRQNSSGGT TRLGAITKQG DAYLRHLLVI GARNIVRYPK ARAKVGGAWI
DALLHRRRPM IVAVAVANKL ARIIWAMMTS GEMFREAHAK IV
|
|---|
| |