Gene Avi_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2706 
Symbol 
ID7388366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2242904 
End bp2243947 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content56% 
IMG OID643651767 
ProductABC transporter nucleotide binding/ATPase protein 
Protein accessionYP_002549954 
Protein GI222148997 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.251131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTTC TCTCTCTCAA TAATCTTTCC AAAACGTTTG CCGGTCTCCC CGCTGTGCGC 
GACATAAGCC TGTCTGTCGA GCGCGGTGAG TTCATCTCCC TGCTTGGCCC CTCCGGCTGC
GGCAAGACAA CAACGCTGCA AATGATTGCG GGCCTTGTGG ATCCATCTGC TGGAAGCATC
ATTCTTGACG GCAGCGACAT CACAAAGACA CCACCAAACC GCCGAGGGCT CGGCATCGTG
TTTCAAACCT ATGCCCTGTT TCCCCATATG ACTGCGTTGG AAAATGTCGC ATTCGGCCTG
GAGATGCGTG GTGTTGCGAA GGTCGAGCGG ATTGAACGCG CTCGTGCCGC CCTCAAGCAG
GTCAAGTTGG AGCAGTTTGC CGCGCGATTT CCTAAAGACA TGTCAGGCGG TCAGCGACAG
CGCGTTGCCT TGGCACGGGC ACTGGTGATT GAGCCTCCCC TGCTCTTGTT GGATGAACCT
CTTTCCAACC TCGATGCGAA ACTGCGCGAA GACATGCGGA TCGAACTACG ATTGCTGCAA
CAGGATCTCG GCGTCACAAC CATTTTGGTA ACCCATGATC AGGAAGAGGC CCTGTCGATG
AGCGATAGGG TTGTGGTCAT GCAGCAAGGT GATATCGCGC AGATTGCCAC ACCGTTGGAG
CTTTATGAGC GCCCAACCAA TGGCTTTGTG TCAGACTTCG TCGGAAAGAC CAATCTGTTG
AGTGCTATTG TTTCCGGTCC GCAGACCGTC GATGTGGGTG GTGAAACCGT GCTGGTAAGA
AACCATGATC TGACGACTGG CACACCCGTG ACGCTCTCCA TTCGCCCTGA GAAATTCCGG
ATGACTGCGA ATGCTCCGGG CCATCAGGTC CGCGTTGAGG CTGCAATTTT TCTGGGTGCA
AGCTGGCTCT ACCGTGTCTC CGGCAGCTTG GGCGATCTGT TTGTGACCCA GCCCAACACT
GGCGAAGCGG GTTATGCCCA AGGTGACATC GCATGGCTTG ATTGGCCCGC AACGGCCATG
AGCATATTTG CGGAGACGGC GTGA
 
Protein sequence
MAFLSLNNLS KTFAGLPAVR DISLSVERGE FISLLGPSGC GKTTTLQMIA GLVDPSAGSI 
ILDGSDITKT PPNRRGLGIV FQTYALFPHM TALENVAFGL EMRGVAKVER IERARAALKQ
VKLEQFAARF PKDMSGGQRQ RVALARALVI EPPLLLLDEP LSNLDAKLRE DMRIELRLLQ
QDLGVTTILV THDQEEALSM SDRVVVMQQG DIAQIATPLE LYERPTNGFV SDFVGKTNLL
SAIVSGPQTV DVGGETVLVR NHDLTTGTPV TLSIRPEKFR MTANAPGHQV RVEAAIFLGA
SWLYRVSGSL GDLFVTQPNT GEAGYAQGDI AWLDWPATAM SIFAETA