Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2706 |
Symbol | |
ID | 7388366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2242904 |
End bp | 2243947 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643651767 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002549954 |
Protein GI | 222148997 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.251131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTTTC TCTCTCTCAA TAATCTTTCC AAAACGTTTG CCGGTCTCCC CGCTGTGCGC GACATAAGCC TGTCTGTCGA GCGCGGTGAG TTCATCTCCC TGCTTGGCCC CTCCGGCTGC GGCAAGACAA CAACGCTGCA AATGATTGCG GGCCTTGTGG ATCCATCTGC TGGAAGCATC ATTCTTGACG GCAGCGACAT CACAAAGACA CCACCAAACC GCCGAGGGCT CGGCATCGTG TTTCAAACCT ATGCCCTGTT TCCCCATATG ACTGCGTTGG AAAATGTCGC ATTCGGCCTG GAGATGCGTG GTGTTGCGAA GGTCGAGCGG ATTGAACGCG CTCGTGCCGC CCTCAAGCAG GTCAAGTTGG AGCAGTTTGC CGCGCGATTT CCTAAAGACA TGTCAGGCGG TCAGCGACAG CGCGTTGCCT TGGCACGGGC ACTGGTGATT GAGCCTCCCC TGCTCTTGTT GGATGAACCT CTTTCCAACC TCGATGCGAA ACTGCGCGAA GACATGCGGA TCGAACTACG ATTGCTGCAA CAGGATCTCG GCGTCACAAC CATTTTGGTA ACCCATGATC AGGAAGAGGC CCTGTCGATG AGCGATAGGG TTGTGGTCAT GCAGCAAGGT GATATCGCGC AGATTGCCAC ACCGTTGGAG CTTTATGAGC GCCCAACCAA TGGCTTTGTG TCAGACTTCG TCGGAAAGAC CAATCTGTTG AGTGCTATTG TTTCCGGTCC GCAGACCGTC GATGTGGGTG GTGAAACCGT GCTGGTAAGA AACCATGATC TGACGACTGG CACACCCGTG ACGCTCTCCA TTCGCCCTGA GAAATTCCGG ATGACTGCGA ATGCTCCGGG CCATCAGGTC CGCGTTGAGG CTGCAATTTT TCTGGGTGCA AGCTGGCTCT ACCGTGTCTC CGGCAGCTTG GGCGATCTGT TTGTGACCCA GCCCAACACT GGCGAAGCGG GTTATGCCCA AGGTGACATC GCATGGCTTG ATTGGCCCGC AACGGCCATG AGCATATTTG CGGAGACGGC GTGA
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Protein sequence | MAFLSLNNLS KTFAGLPAVR DISLSVERGE FISLLGPSGC GKTTTLQMIA GLVDPSAGSI ILDGSDITKT PPNRRGLGIV FQTYALFPHM TALENVAFGL EMRGVAKVER IERARAALKQ VKLEQFAARF PKDMSGGQRQ RVALARALVI EPPLLLLDEP LSNLDAKLRE DMRIELRLLQ QDLGVTTILV THDQEEALSM SDRVVVMQQG DIAQIATPLE LYERPTNGFV SDFVGKTNLL SAIVSGPQTV DVGGETVLVR NHDLTTGTPV TLSIRPEKFR MTANAPGHQV RVEAAIFLGA SWLYRVSGSL GDLFVTQPNT GEAGYAQGDI AWLDWPATAM SIFAETA
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