| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2699 |
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| Symbol | accB |
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| ID | 7388361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2236635 |
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| End bp | 2237570 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643651762 |
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| Product | ABC transporter nucleotide binding/ATPase protein (agrocinopine) |
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| Protein accession | YP_002549949 |
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| Protein GI | 222148992 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACCGTTC GCGACCTCGT CGTCCGGATT CCCGCGCGCA ACATAACGAT CCTGGACGGC
ATCAGTTTCT CTCTGGAGGC AGGTCAGACG CTCGGCCTTG TCGGCGAATC CGGCTGCGGC
AAGAGCATCA CCTGTTATGC GATCGCCAAT GCGCTGCCGC GCGGCATCGT GCTCAGCGGC
GGCAGCGTGG ACTTCGAGCC CCGCGGATCC GGTATCTCCA GGCCGGCTAT CCCGAAGATC
GCGATGATCT TTCAAGACCC GACCAGCAGC CTGAATCCTG TTCATACGAT CGGGTATTAT
CTGGAGACGG CGCTTCACCG CCATCAGGGT CTCAAGGGCA AGGATGCTCG GATGGAGGCC
ATGCGACTTC TGGAACGCGT CGGCATCGAC CGCGCCGCAA GCCGGCTGCG GGCCTATCCG
CACCAGTTTT CCGGCGGCAT GAACCAGCGC GTCATGATCG CGCATGCGCT TGCGGCCAAG
CCCAAGTTGC TGATTGCCGA CGAGCCCACG ACGGCGCTCG ACGTCACCAT GCAGGCCCAG
ATCCTGCATC TGCTGGAAGA GCTGAAGGCG GAAACCGGCA TGGCACTGAT GATCGTATCG
CACGATCTCG GCGTCATTGC CCGGCTCGCG GACAGGGCGG CCGTGATGTA TTGCGGCAAG
ATCGTCGAGA CGGCACCCGT CGCTGAACTG CTCGAACGAC CGGCGCATCC TTACGCACGC
GCGCTGATCG ACTGCATGCC CAGCATCGAT CCGGATGATC TTGCACCGCC GGTCCCAATC
CCTGGGTCTG TCCCGCTGCT CGATAGCCTT CCGGTGGGAT GCCATTTCCA CCCACGCTGC
TTGCGTGCGA GCGGCGAATG TTCCACCCAC TTTCCGGCGC CCACCACTAT CGGTCTCGCC
CACGAGGCCT CCTGTTACCA TCCGGTGGCA GCATGA
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| Protein sequence | MTVRDLVVRI PARNITILDG ISFSLEAGQT LGLVGESGCG KSITCYAIAN ALPRGIVLSG
GSVDFEPRGS GISRPAIPKI AMIFQDPTSS LNPVHTIGYY LETALHRHQG LKGKDARMEA
MRLLERVGID RAASRLRAYP HQFSGGMNQR VMIAHALAAK PKLLIADEPT TALDVTMQAQ
ILHLLEELKA ETGMALMIVS HDLGVIARLA DRAAVMYCGK IVETAPVAEL LERPAHPYAR
ALIDCMPSID PDDLAPPVPI PGSVPLLDSL PVGCHFHPRC LRASGECSTH FPAPTTIGLA
HEASCYHPVA A
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